RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RTKNQ9BST9 563 aa16.3■□□□□ 0.2
SNX6-205ENST00000555648 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
SNX6-205ENST00000555648 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
SNX6-205ENST00000555648 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
SNX6-205ENST00000555648 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
SNX6-205ENST00000555648 LSM7Q9UK45 103 aaKnown RBP16.3■□□□□ 0.2
SNX6-205ENST00000555648 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
SNX6-205ENST00000555648 FAM92AA1XBS5 289 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 CILPO75339 1184 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 BEST1O76090 585 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ALDH1A2O94788 518 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 KAT7O95251 611 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 TGM1P22735 817 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 HOXC13P31276 330 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 GRIA2P42262 883 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
SNX6-205ENST00000555648 ANO4Q32M45 955 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 AASDHQ4L235 1098 aaPredicted RBP16.29■□□□□ 0.2
SNX6-205ENST00000555648 ZCWPW2Q504Y3 356 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 USP39Q53GS9 565 aaKnown RBP16.29■□□□□ 0.2
SNX6-205ENST00000555648 LY6G5CQ5SRR4 150 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
SNX6-205ENST00000555648 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
SNX6-205ENST00000555648 CCDC33Q8N5R6 958 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 NETO1Q8TDF5 533 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 TWNKQ96RR1 684 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 ARRDC1-AS1Q9H2J1 176 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 PNPLA8Q9NP80 782 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 SCML2Q9UQR0 700 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
SNX6-205ENST00000555648 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.28■□□□□ 0.2
SNX6-205ENST00000555648 TBC1D3BA6NDS4 549 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 RALAP11233 206 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 GBP1P32455 592 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 PRCPP42785 496 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 SLC6A11P48066 632 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 ATXN1P54253 815 aaKnown RBP16.28■□□□□ 0.2
SNX6-205ENST00000555648 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
SNX6-205ENST00000555648 KDSRQ06136 332 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 CLEC20AQ6ZU45 233 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 C11orf74Q86VG3 221 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 EZH1Q92800 747 aaPredicted RBP16.28■□□□□ 0.2
SNX6-205ENST00000555648 FAXDC2Q96IV6 333 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 DEC1Q9P2X7 70 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 EBF1Q9UH73 591 aa16.28■□□□□ 0.2
SNX6-205ENST00000555648 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
SNX6-205ENST00000555648 MYO15AQ9UKN7 3530 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 K7EQS6 105 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 CYP26A1O43174 497 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 TIE1P35590 1138 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 PSEN1P49768 467 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 EOGTQ5NDL2 527 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 ANO7Q6IWH7 933 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 BBS7Q8IWZ6 715 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 NAT16Q8N8M0 369 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 ZFRQ96KR1 1074 aaKnown RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 CDK5RAP1Q96SZ6 601 aaKnown RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 DUSP16Q9BY84 665 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 POLMQ9NP87 494 aaPredicted RBP16.27■□□□□ 0.2
SNX6-205ENST00000555648 SPHK2Q9NRA0 654 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 BCCIPQ9P287 314 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNX6-205ENST00000555648 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 NAGPAQ9UK23 515 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 PCDHGA5Q9Y5G8 931 aa16.27■□□□□ 0.2
SNX6-205ENST00000555648 ZNF638Q14966 1978 aaKnown RBP16.27■□□□□ 0.19
SNX6-205ENST00000555648 PSMA7O14818 248 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 ZBTB24O43167 697 aaPredicted RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 EPN2O95208 641 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 KLF8O95600 359 aaPredicted RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 TBX18O95935 607 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 RARGP13631 454 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 TNFRSF4P43489 277 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 GAB4Q2WGN9 574 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 IL31Q6EBC2 164 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 GPRIN1Q7Z2K8 1008 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 TXNDC5Q8NBS9 432 aaKnown RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 TMEM176AQ96HP8 235 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 CYLDQ9NQC7 956 aa16.26■□□□□ 0.19
SNX6-205ENST00000555648 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
SNX6-205ENST00000555648 A0A1W2PQH9 124 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 MED19A0JLT2 244 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms