RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 GLI1P08151 1106 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CTSAP10619 480 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 MARCKSL1P49006 195 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 SULT1E1P49888 294 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 PEX5P50542 639 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC5A3P53794 718 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 YWHAZP63104 245 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ATP11AP98196 1134 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CREMQ03060 361 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 DUSP4Q13115 394 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ZNF211Q13398 564 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ACAP1Q15027 740 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 C15orf59Q2T9L4 293 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ODF2Q5BJF6 829 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 TRNP1Q6NT89 227 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 HFE2Q6ZVN8 426 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 TMC7Q7Z402 723 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 NUP93Q8N1F7 819 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 TTC9BQ8N6N2 239 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 SCAMP5Q8TAC9 235 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 IRGQQ8WZA9 623 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CFAP57Q96MR6 1250 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ZBP1Q9H171 429 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 ZWILCHQ9H900 591 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 POPDC2Q9HBU9 364 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 NGRNQ9NPE2 291 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.11□□□□□ -0.796e-6■□□□□ 8.3
HNRNPC-220ENST00000555585 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CTAGE15A4D2H0 777 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 LINC01553A4QN01 128 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 YJEFN3A6XGL0 299 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 E7ENQ6 273 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 TNFRSF10BO14763 440 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 LPXNO60711 386 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CSPG5O95196 566 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 VNN2O95498 520 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 KRT1P04264 644 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CTAGE8P0CG41 777 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 MYOGP15173 224 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 TCF4P15884 667 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 ELF1P32519 619 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 NOS2P35228 1153 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CETN2P41208 172 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 MATKP42679 507 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 PTPN9P43378 593 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 TUFMP49411 452 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 RAB33AQ14088 237 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SMC1AQ14683 1233 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 DCAF6Q58WW2 860 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SH3PXD2AQ5TCZ1 1133 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SCYL2Q6P3W7 929 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 ARCQ7LC44 396 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CTAGE6Q86UF2 777 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CREG2Q8IUH2 290 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CCDC50Q8IVM0 306 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CTAGE4Q8IX94 777 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SCML4Q8N228 414 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 GPR152Q8TDT2 470 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 GIPC2Q8TF65 315 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 FAM172AQ8WUF8 416 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 ALG3Q92685 438 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 NCAPGQ9BPX3 1015 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 C17orf80Q9BSJ5 609 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 DDX23Q9BUQ8 820 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CARD9Q9H257 536 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 CYP4F11Q9HBI6 524 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 ALG13Q9NP73 1137 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 ENTPD7Q9NQZ7 604 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 DDX56Q9NY93 547 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SMARCAL1Q9NZC9 954 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 FNIP2Q9P278 1114 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 RNF14Q9UBS8 474 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 PCSK1NQ9UHG2 260 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 MTUS1Q9ULD2 1270 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
HNRNPC-220ENST00000555585 SYNJ2BP-COX16A0A087WUM0 186 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC38A8A6NNN8 435 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PGRMC1O00264 195 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PDE2AO00408 941 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 TEX28O15482 410 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 PRPSAP2O60256 369 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 LRCH4O75427 683 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 ABLIM3O94929 683 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 RTN3O95197 1032 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 SEC24AO95486 1093 aa10.09□□□□□ -0.79
HNRNPC-220ENST00000555585 TRUB2O95900 331 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms