RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CTAGE1Q96RT6 745 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 VPS33BQ9H267 617 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 ANKRD62A6NC57 917 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 MYO1CO00159 1063 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 ALDH1L1O75891 902 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 PHKG2P15735 406 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 SCP2P22307 547 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 UQCRC1P31930 480 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 ME1P48163 572 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 CFHR3Q02985 330 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 ATG9BQ674R7 924 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 TMEM65Q6PI78 240 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 B3GNT9Q6UX72 402 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 RAB11FIP4Q86YS3 637 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 DNAJB14Q8TBM8 379 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 EDC3Q96F86 508 aaKnown RBP4.46□□□□□ -1.7
SNX6-204ENST00000555541 VN1R3Q9BXE9 311 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 ATP6V0A4Q9HBG4 840 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 PI4KBQ9UBF8 816 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 HS3ST3B1Q9Y662 390 aa4.46□□□□□ -1.7
SNX6-204ENST00000555541 TCF20Q9UGU0 1960 aaKnown RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 OFD1O75665 1012 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 NCLP19338 710 aaKnown RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 MCM5P33992 734 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 MCL1Q07820 350 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 MTX1Q13505 466 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 SEMA3AQ14563 771 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 IFIT1BQ5T764 474 aaKnown RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 DCAF12L1Q5VU92 463 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 ZNF783Q6ZMS7 281 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 DCDC5Q6ZRR9 648 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 KCTD20Q7Z5Y7 419 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 STAG1Q8WVM7 1258 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 RHOBTB2Q9BYZ6 727 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 HIPK2Q9H2X6 1198 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 ZMAT3Q9HA38 289 aaKnown RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 MLXIPLQ9NP71 852 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 SEMA5BQ9P283 1151 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 PNMA8BQ9ULN7 279 aaPredicted RBP4.45□□□□□ -1.7
SNX6-204ENST00000555541 CDY1Q9Y6F8 540 aa4.45□□□□□ -1.7
SNX6-204ENST00000555541 B4DGG1 531 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 PRSS44E7EML9 344 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 H3BML4 177 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 H3BNX3 289 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 AGPSO00116 658 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 PSMD9O00233 223 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 CD3EAPO15446 510 aaKnown RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 AP1G1O43747 822 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 UBXN7O94888 489 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 HTR1BP28222 390 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 RPS13P62277 151 aaKnown RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 YPEL5P62699 121 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 SLC14A1Q13336 389 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 PIN1Q13526 163 aaPredicted RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 TTF1Q15361 905 aaPredicted RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 NPY5RQ15761 445 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 TMEM63BQ5T3F8 832 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 MICU3Q86XE3 530 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 OR56A3Q8NH54 315 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 PPP1R35Q8TAP8 253 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 TRMOQ9BU70 441 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 FAM234AQ9H0X4 552 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 CNNM1Q9NRU3 951 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 ASAP1Q9ULH1 1129 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 USP22Q9UPT9 525 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 SQORQ9Y6N5 450 aa4.44□□□□□ -1.7
SNX6-204ENST00000555541 TTBK1Q5TCY1 1321 aaPredicted RBP4.44□□□□□ -1.7
SNX6-204ENST00000555541 hCG_2014768A0A024R1R8 64 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 E2F8A0AVK6 867 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 CLIC1O00299 241 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 PDGFRBP09619 1106 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 KITP10721 976 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 CREB1P16220 341 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 EN2P19622 333 aaPredicted RBP4.43□□□□□ -1.7
SNX6-204ENST00000555541 EPHA3P29320 983 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 AGFG1P52594 562 aaKnown RBP4.43□□□□□ -1.7
SNX6-204ENST00000555541 ANAPC15P60006 121 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 SLC13A2Q13183 592 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 ZNF628Q5EBL2 1059 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 EARS2Q5JPH6 523 aaKnown RBP4.43□□□□□ -1.7
SNX6-204ENST00000555541 COLCA1Q6ZS62 124 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 PIM3Q86V86 326 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 ANKRD13BQ86YJ7 626 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 DENND1CQ8IV53 801 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 CHPFQ8IZ52 775 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 SPARTQ8N0X7 666 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 MMP21Q8N119 569 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 OR6B3Q8NGW1 331 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 AIFM3Q96NN9 605 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 RTFDC1Q9BY42 306 aaPredicted RBP4.43□□□□□ -1.7
SNX6-204ENST00000555541 MLXIPQ9HAP2 919 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 TRIM36Q9NQ86 728 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
SNX6-204ENST00000555541 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
SNX6-204ENST00000555541 AKAP10O43572 662 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms