RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GOLGA6L6A8MZA4 724 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 RTN2O75298 545 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 OLFM2O95897 454 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 ERBB2P04626 1255 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 FAM228BP0C875 321 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 PGFP49763 221 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 TFF2Q03403 129 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 SLC18A3Q16572 532 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 ARCQ7LC44 396 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 MRPS31Q92665 395 aaKnown RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 FGF13Q92913 245 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-219ENST00000555323 TASP1Q9H6P5 420 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 NMUR1Q9HB89 426 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 ASNSD1Q9NWL6 643 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 OSER1Q9NX31 292 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 TAS2R14Q9NYV8 317 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 GDE1Q9NZC3 331 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 GMIPQ9P107 970 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 NAGPAQ9UK23 515 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
SYNE2-219ENST00000555323 PRUNE2Q8WUY3 3088 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 A0A1W2PQH9 124 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 YJEFN3A6XGL0 299 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 E7ENQ6 273 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 PIK3R2O00459 728 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 LCA5LO95447 670 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 OAS1P00973 400 aaKnown RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 CALB1P05937 261 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 GJA1P17302 382 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 SLC6A3Q01959 620 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 TEAD2Q15562 447 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 BSPRYQ5W0U4 402 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 KLHDC10Q6PID8 442 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 CLEC4CQ8WTT0 213 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 NDRG1Q92597 394 aaKnown RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 SLC46A2Q9BY10 475 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
SYNE2-219ENST00000555323 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 STRIP2Q9ULQ0 834 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 PATJQ8NI35 1801 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 MYH10P35580 1976 aa13.31□□□□□ -0.28
SYNE2-219ENST00000555323 COL6A3P12111 3177 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TCRBV5S1A1TA0A578 114 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 FYNP06241 537 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 LAMP2P13473 410 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 CEBPBP17676 345 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYNE2-219ENST00000555323 YWHAZP63104 245 aaKnown RBP13.3□□□□□ -0.28
SYNE2-219ENST00000555323 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
SYNE2-219ENST00000555323 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 HECTD3Q5T447 861 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 MMS22LQ6ZRQ5 1243 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 SLC26A9Q7LBE3 791 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 OTOP3Q7RTS5 596 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TMEM139Q8IV31 216 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 MYADMQ96S97 322 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
SYNE2-219ENST00000555323 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 RNF38Q9H0F5 515 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 TRPV4Q9HBA0 871 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 EPS15L1Q9UBC2 864 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 PRKAG3Q9UGI9 489 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
SYNE2-219ENST00000555323 C2orf78A6NCI8 922 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 AKR1B10O60218 316 aa13.29□□□□□ -0.28
SYNE2-219ENST00000555323 TLR5O60602 858 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms