RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-205	ENST00000555295	LSM7	Q9UK45	103 aa	Known RBP	13.6	□□□□□ -0.23
PABPN1-205	ENST00000555295	PCDHA5	Q9Y5H7	936 aa		13.6	□□□□□ -0.23
PABPN1-205	ENST00000555295	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	TNFRSF10B	O14763	440 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	TLR5	O60602	858 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	RHOBTB1	O94844	696 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	LETM1	O95202	739 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	CD58	P19256	250 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	OPRD1	P41143	372 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	MXI1	P50539	228 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	DGKE	P52429	567 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	SLC8A3	P57103	927 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	MRPS21	P82921	87 aa	Known RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	AASDH	Q4L235	1098 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	USP39	Q53GS9	565 aa	Known RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	C2orf27A	Q580R0	203 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	NAIF1	Q69YI7	327 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	PAQR9	Q6ZVX9	377 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	ADGRG2	Q8IZP9	1017 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	TAS1R2	Q8TE23	839 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	USP33	Q8TEY7	942 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	JAKMIP2	Q96AA8	810 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	ELMO3	Q96BJ8	720 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	CYFIP2	Q96F07	1278 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	FAXDC2	Q96IV6	333 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	HNRNPAB	Q99729	332 aa	Known RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	SMO	Q99835	787 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	GOLPH3L	Q9H4A5	285 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	CSNK1G1	Q9HCP0	422 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	PNPLA8	Q9NP80	782 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	1e-10	■■■□□ 15
PABPN1-205	ENST00000555295	ARHGEF4	Q9NR80	690 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	IL37	Q9NZH6	218 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	TMEM63C	Q9P1W3	806 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	HMGXB4	Q9UGU5	601 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	EBF1	Q9UH73	591 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	PCDHGA5	Q9Y5G8	931 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	DMD	P11532	3685 aa		13.59	□□□□□ -0.23
PABPN1-205	ENST00000555295	FAM92A	A1XBS5	289 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	SCAMP3	O14828	347 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	EPN2	O95208	641 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	KAT7	O95251	611 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	IRF1	P10914	325 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	TGM1	P22735	817 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	GBP1	P32455	592 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	ATP5C1	P36542	298 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	GRIA2	P42262	883 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	ATXN1	P54253	815 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	ZXDB	P98169	803 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	STIM1	Q13586	685 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	EOGT	Q5NDL2	527 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	TRMT11	Q7Z4G4	463 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	C12orf29	Q8N999	325 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	DDX1	Q92499	740 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	DUSP9	Q99956	384 aa	Known RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	CCSER2	Q9H7U1	834 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	POLM	Q9NP87	494 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	MMP17	Q9ULZ9	603 aa		13.58	□□□□□ -0.24
PABPN1-205	ENST00000555295	SLC30A4	O14863	429 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ZBTB24	O43167	697 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	CILP	O75339	1184 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ZDHHC11B	P0C7U3	371 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	RALA	P11233	206 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ACO1	P21399	889 aa	Known RBP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	PSEN1	P49768	467 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	KDSR	Q06136	332 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	PPP3CA	Q08209	521 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ANO4	Q32M45	955 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ZCWPW2	Q504Y3	356 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	LY6G5C	Q5SRR4	150 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	C1orf220	Q5T0J3	134 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	CCDC183	Q5T5S1	534 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	TCERG1L	Q5VWI1	586 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	IL31	Q6EBC2	164 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	RHBDF2	Q6PJF5	856 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	KBTBD6	Q86V97	674 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	TTC30A	Q86WT1	665 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	FBXL13	Q8NEE6	735 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	SMARCE1	Q969G3	411 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ZC3H10	Q96K80	434 aa	Known RBP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	HEXIM2	Q96MH2	286 aa	Known RBP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	GSDMA	Q96QA5	445 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	ARRDC1-AS1	Q9H2J1	176 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	DEC1	Q9P2X7	70 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	SCML2	Q9UQR0	700 aa		13.57	□□□□□ -0.24
PABPN1-205	ENST00000555295	MED19	A0JLT2	244 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295		K7EQS6	105 aa		13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	SLC16A3	O15427	465 aa	Known RBP	13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	HOXC11	O43248	304 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	BEST1	O76090	585 aa		13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	KLF8	O95600	359 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	MPL	P40238	635 aa		13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	TNFRSF4	P43489	277 aa		13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	YWHAE	P62258	255 aa	Known RBP	13.56	□□□□□ -0.24
PABPN1-205	ENST00000555295	PNOC	Q13519	176 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms