RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 ETFBKMTQ8IXQ9 262 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 CCDC127Q96BQ5 260 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 DEC1Q9P2X7 70 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
XRCC3-212ENST00000555231 PKD1L2Q7Z442 2459 aa13.93□□□□□ -0.18
XRCC3-212ENST00000555231 OPHN1O60890 802 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-212ENST00000555231 SERPINF2P08697 491 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 CYP2J2P51589 502 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 MYL6P60660 151 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 SNRNP35Q16560 246 aaKnown RBP13.92□□□□□ -0.18
XRCC3-212ENST00000555231 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 EGFLAMQ63HQ2 1017 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 SLC41A1Q8IVJ1 513 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 TERB1Q8NA31 727 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 B3GALNT2Q8NCR0 500 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 CEP76Q8TAP6 659 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 ACOX2Q99424 681 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 MED10Q9BTT4 135 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 CAPN10Q9HC96 672 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 KIAA1586Q9HCI6 787 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 CD93Q9NPY3 652 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 SPHK2Q9NRA0 654 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 GMIPQ9P107 970 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 CYP8B1Q9UNU6 501 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 WDFY3Q8IZQ1 3526 aa13.92□□□□□ -0.18
XRCC3-212ENST00000555231 IGHV1OR15-9A0A0B4J2B8 117 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 A0A1W2PQF6 199 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 UPK3BL1B0FP48 263 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 UPK3BL2E5RIL1 263 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-212ENST00000555231 CLSTN1O94985 981 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 CD59P13987 128 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 NTSR1P30989 418 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 SLC5A3P53794 718 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 CDH8P55286 799 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 TRPC3Q13507 836 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 PSMD6Q15008 389 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 TRMT11Q7Z4G4 463 aaKnown RBP13.91□□□□□ -0.18
XRCC3-212ENST00000555231 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 OTUB2Q96DC9 234 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 USP28Q96RU2 1077 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 TRIM9Q9C026 710 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 SLC6A17Q9H1V8 727 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 SMYD3Q9H7B4 428 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 RAD54BQ9Y620 910 aa13.91□□□□□ -0.18
XRCC3-212ENST00000555231 ADAMTS20P59510 1910 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 TAF4O00268 1085 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 NDUFV2P19404 249 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 HOXD12P35452 270 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 PGFP49763 221 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 CYP24A1Q07973 514 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 GRAMD4Q6IC98 578 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 CHPFQ8IZ52 775 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 RGL4Q8IZJ4 473 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 ZNF507Q8TCN5 953 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 IPO4Q8TEX9 1081 aaKnown RBP13.9□□□□□ -0.18
XRCC3-212ENST00000555231 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 HSPA12BQ96MM6 686 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 NACA2Q9H009 215 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-212ENST00000555231 AGPAT3Q9NRZ7 376 aa13.9□□□□□ -0.18
XRCC3-212ENST00000555231 DNAJC17Q9NVM6 304 aaKnown RBP13.9□□□□□ -0.18
XRCC3-212ENST00000555231 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
XRCC3-212ENST00000555231 PRRT4C9JH25 899 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 NEDD8-MDP1E9PL57 170 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 H0Y626 953 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 SH3BP5O60239 455 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 PHACTR2O75167 634 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 TRIM16O95361 564 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 RDXP35241 583 aaKnown RBP13.89□□□□□ -0.19
XRCC3-212ENST00000555231 CASP4P49662 377 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 ASIC1P78348 528 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 ORC1Q13415 861 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 ACAP1Q15027 740 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 PREPLQ4J6C6 727 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-212ENST00000555231 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 TOGARAM2Q6ZUX3 1019 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
XRCC3-212ENST00000555231 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms