RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 BEST1O76090 585 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 FBXO21O94952 628 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 GJA1P17302 382 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 PLA2G4AP47712 749 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 POLR2FP61218 127 aaKnown RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 FANCCQ00597 558 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 IFRD2Q12894 506 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 NR1I3Q14994 352 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 FAM78AQ5JUQ0 283 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 HECTD3Q5T447 861 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 GJB7Q6PEY0 223 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 DDX42Q86XP3 938 aaKnown RBP eCLIP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF677Q86XU0 584 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SIX6OS1Q8N1H7 587 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SCML4Q8N228 414 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF276Q8N554 614 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 MAB21L3Q8N8X9 362 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZMIZ2Q8NF64 920 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF397Q8NF99 534 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SCAMP5Q8TAC9 235 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SLC35F5Q8WV83 523 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 TFAP2BQ92481 460 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 GOLGA1Q92805 767 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 TRIM62Q9BVG3 475 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 TRMT61BQ9BVS5 477 aaKnown RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SLC46A2Q9BY10 475 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 NACA2Q9H009 215 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 LHX5Q9H2C1 402 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 TRPC7Q9HCX4 862 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 CNGB3Q9NQW8 809 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 TDP1Q9NUW8 608 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 MYO6Q9UM54 1294 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 USP3Q9Y6I4 520 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 ZBED1O96006 694 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 SRFP11831 508 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PSMC3P17980 439 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
TMEM260-206ENST00000555046 TKTL1P51854 596 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 NUBP1P53384 320 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 CACNA2D1P54289 1103 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 USP46P62068 366 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PDE4CQ08493 712 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 GOLGA8FQ08AF8 430 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 GOLGA8DPQ0D2H9 430 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 HTR4Q13639 388 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 RAB41Q5JT25 222 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 TXNDC8Q6A555 127 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 DPY19L2P1Q6NXN4 242 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 APTXQ7Z2E3 356 aaKnown RBP11.15□□□□□ -0.62
TMEM260-206ENST00000555046 CCDC186Q7Z3E2 898 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 TMEM150AQ86TG1 271 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 MSANTD4Q8NCY6 345 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 UBA3Q8TBC4 463 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 IRF7Q92985 503 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 SHDQ96IW2 340 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 ZSWIM3Q96MP5 696 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 NUCKS1Q9H1E3 243 aaKnown RBP11.15□□□□□ -0.62
TMEM260-206ENST00000555046 CLIC5Q9NZA1 410 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 PCDHGC3Q9UN70 934 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 NUMBLQ9Y6R0 609 aa11.15□□□□□ -0.62
TMEM260-206ENST00000555046 HHLA1C9JL84 531 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 F8VZ95 297 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 ZNF263O14978 683 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 CKMP06732 381 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 ZDHHC11BP0C7U3 371 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 CYP11B1P15538 503 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 CLCN1P35523 988 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 SOX5P35711 763 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 ATP5C1P36542 298 aaKnown RBP11.14□□□□□ -0.63
TMEM260-206ENST00000555046 GPD2P43304 727 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 SLC7A9P82251 487 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 CYP4F8P98187 520 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 AMPD2Q01433 879 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 SIGLEC14Q08ET2 396 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 PM20D1Q6GTS8 502 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 TANGO2Q6ICL3 276 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 KLHDC10Q6PID8 442 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 C1orf228Q6PIY5 440 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 TTC30AQ86WT1 665 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 TMEM35BQ8NCS4 154 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 BPIFB1Q8TDL5 484 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 IRGQQ8WZA9 623 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 FGF14Q92915 247 aa11.14□□□□□ -0.63
TMEM260-206ENST00000555046 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms