RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 FRG1Q14331 258 aaKnown RBP13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 C4orf22Q6V702 233 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 OR6Y1Q8NGX8 325 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 SMYD2Q9NRG4 433 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 MOCS1Q9NZB8 636 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 CSADQ9Y600 493 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 USH1CQ9Y6N9 552 aa13.15□□□□□ -0.3
PPP4R3A-206ENST00000554943 PAPSS1O43252 624 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 DLDP09622 509 aaKnown RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC6A3Q01959 620 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 GRB14Q14449 540 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 TMEM132DQ14C87 1099 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 GSTA5Q7RTV2 222 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 RXFP2Q8WXD0 754 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 ISL2Q96A47 359 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SIGLEC10Q96LC7 697 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLCO1B3Q9NPD5 702 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 DPP3Q9NY33 737 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SGK1O00141 431 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 RFPL1O75677 317 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 ATP5HO75947 161 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 FAM163BP0C2L3 166 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 STX2P32856 288 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 EIF3EP60228 445 aaKnown RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 RBP5P82980 135 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 HIC1Q14526 733 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 DCAF4L1Q3SXM0 396 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 PPP1R26Q5T8A7 1209 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC26A9Q7LBE3 791 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SAR1AQ9NR31 198 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 PRKCGP05129 697 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 NRLP54845 237 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 ZNF449Q6P9G9 518 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 GADL1Q6ZQY3 521 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 USP50Q70EL3 339 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 QKIQ96PU8 341 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■□□□ 12.8
PPP4R3A-206ENST00000554943 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 ZWILCHQ9H900 591 aa13.14□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 HAS3O00219 553 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 DDNO94850 711 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 KRT4P19013 534 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SEMA5AQ13591 1074 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 CA9Q16790 459 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 BOLA3Q53S33 107 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 PRPF39Q86UA1 669 aaKnown RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 FAM71DQ8N9W8 422 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 NLRP4Q96MN2 994 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 PITPNM3Q9BZ71 974 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SIRPGQ9P1W8 387 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 MMP3P08254 477 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 HARSP12081 509 aaKnown RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 KCNE1P15382 129 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 PHBP35232 272 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 MAGEA12P43365 314 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 MGARPQ8TDB4 240 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 OTUD5Q96G74 571 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 MLXIPLQ9NP71 852 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC17A7Q9P2U7 560 aa13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3A-206ENST00000554943 NYNRINQ9P2P1 1898 aaKnown RBP13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 M0QYV0 167 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 PPEF2O14830 753 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 GM2AP17900 193 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 SLC8A1P32418 973 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 ELK3P41970 407 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 NIPAL4Q0D2K0 466 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 ORC1Q13415 861 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 DBN1Q16643 649 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 ANKRD42Q8N9B4 389 aa13.12□□□□□ -0.31
PPP4R3A-206ENST00000554943 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms