RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PFKFB4Q16877 469 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF750Q32MQ0 723 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ARHGAP15Q53QZ3 475 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 TREML2Q5T2D2 321 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 CERCAMQ5T4B2 595 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 TSTD2Q5T7W7 516 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 DEPDC1Q5TB30 811 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 FBXO38Q6PIJ6 1188 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 YAF2Q8IY57 180 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ABRAQ8N0Z2 381 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 NKAPQ8N5F7 415 aaKnown RBP3.69□□□□□ -1.82
SCFD1-213ENST00000554776 GLIS1Q8NBF1 620 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 DNAJB14Q8TBM8 379 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 TMEM171Q8WVE6 324 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 OSCP1Q8WVF1 389 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 SOCS4Q8WXH5 440 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PPP2R3CQ969Q6 453 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 SCLT1Q96NL6 688 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 HAPLN3Q96S86 360 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 TRIM5Q9C035 493 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 GLOD4Q9HC38 313 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 CPNE5Q9HCH3 593 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 OBP2BQ9NPH6 170 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 LRFN1Q9P244 771 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 GRHPRQ9UBQ7 328 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 DKK4Q9UBT3 224 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ADAM21Q9UKJ8 722 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 CAPN11Q9UMQ6 739 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ST3GAL5Q9UNP4 418 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 hCG_1642624A0A1W2PR95 340 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 A1L4Q6 167 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 CLCA1A8K7I4 914 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 LGALS16A8MUM7 142 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 NPHP1O15259 732 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 CD3EAPO15446 510 aaKnown RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 INMTO95050 263 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 ONECUT2O95948 504 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 FESP07332 822 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 EBLN1P0CF75 366 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 BTF3P20290 206 aaKnown RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 DRD4P21917 467 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 CD38P28907 300 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 CCT8P50990 548 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 RENBPP51606 427 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 ICA1Q05084 483 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 RAPGEF1Q13905 1077 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 KCNAB1Q14722 419 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 PDCD2Q16342 344 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 LY6KQ17RY6 165 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 FAM153CQ494X1 144 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 CACHD1Q5VU97 1274 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 PLAG1Q6DJT9 500 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 PGBD2Q6P3X8 592 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 LDHAL6AQ6ZMR3 332 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 BEND5Q7L4P6 421 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 RASAL3Q86YV0 1011 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 IZUMO1Q8IYV9 350 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 SPARTQ8N0X7 666 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 VGLL2Q8N8G2 317 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF384Q8TF68 577 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 IPCEF1Q8WWN9 437 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 R3HDM4Q96D70 268 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 C17orf80Q9BSJ5 609 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 STK33Q9BYT3 514 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.68□□□□□ -1.826e-9■□□□□ 8.9
SCFD1-213ENST00000554776 GBA2Q9HCG7 927 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 ARHGEF3Q9NR81 526 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 IGSF9Q9P2J2 1179 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 GABRQQ9UN88 632 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 SCAF8Q9UPN6 1271 aaKnown RBP3.68□□□□□ -1.82
SCFD1-213ENST00000554776 KAT6AQ92794 2004 aa3.68□□□□□ -1.82
SCFD1-213ENST00000554776 AQP7P3A6NL99 342 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 MASP2O00187 686 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TRIM38O00635 465 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 PIP5K1BO14986 540 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 AREL1O15033 823 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 RBMXL2O75526 392 aaKnown RBP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 PIAS2O75928 621 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TJP3O95049 919 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 RASAL1O95294 804 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TNFRSF6BO95407 300 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 VNN1O95497 513 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CSTBP04080 98 aaKnown RBP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TPH1P17752 444 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 YY1P25490 414 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 GABRB3P28472 473 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 UQCRC1P31930 480 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 PROK1P58294 105 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 C21orf58P58505 322 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TIAL1Q01085 375 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 BLMHQ13867 455 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CCNIQ14094 377 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CCDC142Q17RM4 750 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 TMEM95Q3KNT9 176 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 COLEC12Q5KU26 742 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 RAP1GAP2Q684P5 730 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 SLC9A4Q6AI14 798 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 ANKRD16Q6P6B7 361 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CRTC1Q6UUV9 634 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CATSPERGQ6ZRH7 1159 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms