RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 SMPD4Q9NXE4 827 aa13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 CLIC5Q9NZA1 410 aa13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 CPQQ9Y646 472 aa13.59□□□□□ -0.23
MTHFD1-208ENST00000554739 THAP12O43422 761 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 MED7O43513 233 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 MBL2P11226 248 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 RARGP13631 454 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 GLULP15104 373 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 RPL34P49207 117 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 RGS7P49802 495 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 CLCN5P51795 746 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 PTK2Q05397 1052 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 TNK2Q07912 1038 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 USP4Q13107 963 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 MTF1Q14872 753 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 CC2D1AQ6P1N0 951 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 BHLHA9Q7RTU4 235 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 KIAA1958Q8N8K9 716 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 STK32AQ8WU08 396 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 NDRG1Q92597 394 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 HSFY1Q96LI6 401 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 ERGIC2Q96RQ1 377 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 LINC00597Q9H2U6 94 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 TBC1D17Q9HA65 648 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 GTSE1Q9NYZ3 720 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 NAGPAQ9UK23 515 aa13.58□□□□□ -0.24
MTHFD1-208ENST00000554739 GREB1Q4ZG55 1949 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 OTOL1A6NHN0 477 aaPredicted RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 EPHB6O15197 1021 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 TEX33O43247 280 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 PI15O43692 258 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 LCP1P13796 627 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 AOC1P19801 751 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CD72P21854 359 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 AVPR2P30518 371 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 ATP5C1P36542 298 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 VCPP55072 806 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 BPIFB4P59827 614 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 POLR2FP61218 127 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 ADIGQ0VDE8 80 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 PDGFRLQ15198 375 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CWF19L1Q69YN2 538 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 ASTLQ6HA08 431 aaPredicted RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 KLHDC10Q6PID8 442 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 TPRG1Q6ZUI0 275 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 LUZP1Q86V48 1076 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 SUGP1Q8IWZ8 645 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 SCML4Q8N228 414 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 ARHGAP18Q8N392 663 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 TTC8Q8TAM2 541 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CSGALNACT1Q8TDX6 532 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 OSCP1Q8WVF1 389 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 KLF16Q9BXK1 252 aaPredicted RBP13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 SLC4A5Q9BY07 1137 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 EBF3Q9H4W6 596 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 HPS4Q9NQG7 708 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CFAP97Q9P2B7 532 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 NUDT5Q9UKK9 219 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 PIAS3Q9Y6X2 628 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 WDFY4Q6ZS81 3184 aa13.57□□□□□ -0.24
MTHFD1-208ENST00000554739 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 YJEFN3A6XGL0 299 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 E7ENQ6 273 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 F8VZ95 297 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 PIK3R2O00459 728 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 STK25O00506 426 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 RALAP11233 206 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 ARSAP15289 507 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 JAM2P57087 298 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 DAOAP59103 153 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 YWHAGP61981 247 aaKnown RBP eCLIP13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 RUNX3Q13761 415 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 EML3Q32P44 896 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 ITPRIPL2Q3MIP1 535 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 C10orf120Q5SQS8 335 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 TMEM110Q86TL2 294 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 SCUBE3Q8IX30 993 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 ADGRG2Q8IZP9 1017 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 WBP2Q969T9 261 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 NAP1L5Q96NT1 182 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 NELL2Q99435 816 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms