RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 BTBD10Q9BSF8 475 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 RTFDC1Q9BY42 306 aaPredicted RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 TRMT6Q9UJA5 497 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 ATP5BP06576 529 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 AVPR1AP37288 418 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 TMEM62Q0P6H9 643 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CACHD1Q5VU97 1274 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 TIGD7Q6NT04 549 aaPredicted RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SV2AQ7L0J3 742 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 ACTL9Q8TC94 416 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 GPR63Q9BZJ6 419 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CYP3A43Q9HB55 503 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SYTL2Q9HCH5 934 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CYTH3O43739 400 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF23P17027 643 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SLC34A1Q06495 639 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 WASHC5Q12768 1159 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SEZ6Q53EL9 994 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 STRA8Q7Z7C7 330 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 VCPIP1Q96JH7 1222 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 POP1Q99575 1024 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 THUMPD3Q9BV44 507 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 APOL5Q9BWW9 433 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 RBP1P09455 135 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CHRNB3Q05901 458 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SGO1Q5FBB7 561 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 STYK1Q6J9G0 422 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 RNPEPQ9H4A4 650 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CISHQ9NSE2 258 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 IARS2Q9NSE4 1012 aaKnown RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 IMPAD1Q9NX62 359 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.39□□□□□ -0.11
VTI1B-204ENST00000554659 FCGR1AP12314 374 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 PPP3CCP48454 512 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 MGAT5Q09328 741 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ARHGEF7Q14155 803 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 DGKDQ16760 1214 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 AP4E1Q9UPM8 1137 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 HEATR9A2RTY3 570 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 PGK2P07205 417 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 HOXD10P28358 340 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ETFBP38117 255 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 BCAT1P54687 386 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 EARS2Q5JPH6 523 aaKnown RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 SH3RF1Q7Z6J0 888 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 APOPT1Q96IL0 206 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF512Q96ME7 567 aaPredicted RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 NINJ2Q9NZG7 142 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 RNF112Q9ULX5 631 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 LRCH1Q9Y2L9 728 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ACOT9Q9Y305 439 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 SRRM3A6NNA2 597 aaPredicted RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 TP53BP2Q13625 1128 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 TTLL9Q3SXZ7 439 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 ADGRA1Q86SQ6 560 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 TADA1Q96BN2 335 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 HES6Q96HZ4 224 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 LRRC4BQ9NT99 713 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 A0A087X0B3 334 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 CTSHP09668 335 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 CACNA2D1P54289 1103 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 OASLQ15646 514 aaKnown RBP14.38□□□□□ -0.11
VTI1B-204ENST00000554659 VPS72Q15906 364 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 C11orf74Q86VG3 221 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 PPP2R3CQ969Q6 453 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 TRPC7Q9HCX4 862 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 C15orf41Q9Y2V0 281 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
VTI1B-204ENST00000554659 E9PBE3 544 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 KLHL41O60662 606 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ASMTLO95671 621 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF484Q5JVG2 852 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 NDEL1Q9GZM8 345 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 FBXO28Q9NVF7 368 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 WWOXQ9NZC7 414 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CLCA2Q9UQC9 943 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 DDX3XO00571 662 aaKnown RBP eCLIP14.37□□□□□ -0.113e-37■■■■■ 37
VTI1B-204ENST00000554659 MPOP05164 745 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 PYGMP11217 842 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CAP2P40123 477 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 RPL10AP62906 217 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 GCNT1Q02742 428 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MPP3Q13368 585 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms