RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 COMTP21964 271 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 NOS2P35228 1153 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 CETN2P41208 172 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 MATKP42679 507 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 PSEN1P49768 467 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ERVFC1P60507 584 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 PTPROQ16827 1216 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ZFYVE27Q5T4F4 411 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 MEI1Q5TIA1 1274 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 BTBD8Q5XKL5 378 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 RTL10Q7L3V2 364 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ITIH5Q86UX2 942 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 TCEAL8Q8IYN2 117 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ELMOD1Q8N336 334 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 JOSD2Q8TAC2 188 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 RNF139Q8WU17 664 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 ARNTL2Q8WYA1 636 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 PPP2R3CQ969Q6 453 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 BTBD6Q96KE9 485 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 SLITRK1Q96PX8 696 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 TMEM59LQ9UK28 342 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 HYOU1Q9Y4L1 999 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 SAR1BQ9Y6B6 198 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
TMEM55B-205ENST00000554028 C2orf71A6NGG8 1288 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 C2CD4BA6NLJ0 364 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC38A8A6NNN8 435 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 DPYSL4O14531 572 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 ENC1O14682 589 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 GRM6O15303 877 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 DAB1O75553 588 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 LRG1P02750 347 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 PRLRP16471 622 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 GBP1P32455 592 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 PBX2P40425 430 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 YWHAGP61981 247 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 SMAD3P84022 425 aaKnown RBP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 BSPRYQ5W0U4 402 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 BEND5Q7L4P6 421 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 GPRIN1Q7Z2K8 1008 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 NT5DC3Q86UY8 548 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 RHOT1Q8IXI2 618 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 DEFB106AQ8N104 65 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 EMC1Q8N766 993 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 NIPA2Q8N8Q9 360 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 PDZD8Q8NEN9 1154 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 GIPC2Q8TF65 315 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 FBXO32Q969P5 355 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 DDX23Q9BUQ8 820 aaKnown RBP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 TLR8Q9NR97 1041 aaKnown RBP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 ABCC13Q9NSE7 274 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 TMEM30AQ9NV96 361 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 ASB3Q9Y575 518 aa10.95□□□□□ -0.66
TMEM55B-205ENST00000554028 YJEFN3A6XGL0 299 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 E7ENQ6 273 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 FSCN2O14926 492 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TGM5O43548 720 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PRPSAP2O60256 369 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SOAT2O75908 522 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 CSPG5O95196 566 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SEC24AO95486 1093 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 F9P00740 461 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 ATP1A1P05023 1023 aaKnown RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 KRT7P08729 469 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 RALAP11233 206 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 NCAM1P13591 858 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PAFAH1B1P43034 410 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PTPN9P43378 593 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PPP3CCP48454 512 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 GPR15P49685 360 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 DNA2P51530 1060 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 RWDD2BP57060 319 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TWF1Q12792 350 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TAF5Q15542 800 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 CLUL1Q15846 466 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC25A52Q3SY17 297 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 IER5LQ5T953 404 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 SDHAF4Q5VUM1 108 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PAPD7Q5XG87 772 aaKnown RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 RSRC2Q7L4I2 434 aaKnown RBP10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 TTC9BQ8N6N2 239 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 GPR152Q8TDT2 470 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 CLEC4CQ8WTT0 213 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 OVCA2Q8WZ82 227 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 HES6Q96HZ4 224 aa10.94□□□□□ -0.66
TMEM55B-205ENST00000554028 PBKQ96KB5 322 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms