RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NKX1-2Q9UD57 310 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 GINS2Q9Y248 185 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 IQANK1A0A1B0GTG1 560 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 C2CD2LO14523 706 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 PFKMP08237 780 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 GM2AP17900 193 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 BGNP21810 368 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 IL4RP24394 825 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CDC25CP30307 473 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 SLC26A2P50443 739 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 TFDP2Q14188 446 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 ACAP1Q15027 740 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 GOLGA7BQ2TAP0 167 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 PPP1R26Q5T8A7 1209 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 ACOT1Q86TX2 421 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 GPC2Q8N158 579 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 FAM13CQ8NE31 585 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 FAM172AQ8WUF8 416 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 SLC44A1Q8WWI5 657 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 NLRP7Q8WX94 980 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 MIS12Q9H081 205 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 DPP3Q9NY33 737 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 TRIP11Q15643 1979 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 ATP5HO75947 161 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 DDNO94850 711 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 ENDOD1O94919 500 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 MCF2P10911 925 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 TFE3P19532 575 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 BCAR1P56945 870 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 SLC45A4Q5BKX6 768 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CDHR3Q6ZTQ4 885 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 RSRC1Q96IZ7 334 aaKnown RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 MAGEB5Q9BZ81 275 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 VPS11Q9H270 941 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 CYP3A43Q9HB55 503 aa15.16■□□□□ 0.02
ACTN1-211ENST00000553882 FBXO6Q9NRD1 293 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-211ENST00000553882 DNAJC25-GNG10A0A024R161 153 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 SLC25A27O95847 323 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ZBED1O96006 694 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ATICP31939 592 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 YWHAZP63104 245 aaKnown RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 PQLC3Q8N755 202 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ALKBH8Q96BT7 664 aaKnown RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ASB7Q9H672 318 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 HEY2Q9UBP5 337 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 TRIM49D1C9J1S8 452 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 H0Y3Z8 333 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 LGALS2P05162 132 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ATXN1P54253 815 aaKnown RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 TNFAIP2Q03169 654 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 NAA25Q14CX7 972 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 FAM47CQ5HY64 1035 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 PCDH19Q8TAB3 1148 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 APOPT1Q96IL0 206 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ZNF570Q96NI8 536 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 MECRQ9BV79 373 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 TRIM55Q9BYV6 548 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 ZC3H7BQ9UGR2 993 aaKnown RBP15.15■□□□□ 0.02
ACTN1-211ENST00000553882 SNX9Q9Y5X1 595 aa15.15■□□□□ 0.02
ACTN1-211ENST00000553882 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SMAPO00193 183 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 APOL1O14791 398 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 PPEF2O14830 753 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 CHADO15335 359 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 HCRTO43612 131 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 UGT1A9O60656 530 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ETV4P43268 484 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 INCA1Q0VD86 236 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 BMPR2Q13873 1038 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 TTC30AQ86WT1 665 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 MAP7D3Q8IWC1 876 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ACAP3Q96P50 834 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SNRNP25Q9BV90 132 aaKnown RBP15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SLC13A1Q9BZW2 595 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 VRTNQ9H8Y1 702 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 UGT1A7Q9HAW7 530 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 UGT1A10Q9HAW8 530 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 UGT1A8Q9HAW9 530 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 PCDH18Q9HCL0 1135 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 NR2E3Q9Y5X4 410 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SCN1AP35498 2009 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 ENTPD5O75356 428 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SERPINB3P29508 390 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 SDC4P31431 198 aa15.14■□□□□ 0.01
ACTN1-211ENST00000553882 RBP5P82980 135 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms