RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 IL21Q9HBE4 155 aa16.97■□□□□ 0.31
ACTN1-209ENST00000553659 SEMA4GQ9NTN9 838 aa16.97■□□□□ 0.31
ACTN1-209ENST00000553659 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
ACTN1-209ENST00000553659 GUCA1BQ9UMX6 200 aa16.97■□□□□ 0.31
ACTN1-209ENST00000553659 C2CD2Q9Y426 696 aa16.97■□□□□ 0.31
ACTN1-209ENST00000553659 ANKRD63C9JTQ0 380 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 CYB561D2O14569 222 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 SLC30A4O14863 429 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 PRAMEF12O95522 483 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 ATF6P18850 670 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 ACOT2P49753 483 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 JAM2P57087 298 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 CYP4F8P98187 520 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 TNK2Q07912 1038 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 SRSF5Q13243 272 aaKnown RBP16.96■□□□□ 0.31
ACTN1-209ENST00000553659 ITPRIPL2Q3MIP1 535 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 HEATR6Q6AI08 1181 aaKnown RBP16.96■□□□□ 0.31
ACTN1-209ENST00000553659 PRR23CQ6ZRP0 262 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 CBWD1Q9BRT8 395 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 SLC46A2Q9BY10 475 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
ACTN1-209ENST00000553659 SIX2Q9NPC8 291 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 C2orf42Q9NWW7 574 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 DPP3Q9NY33 737 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 APEX2Q9UBZ4 518 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 ZMYM5Q9UJ78 669 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 FHOD1Q9Y613 1164 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 SPTBN2O15020 2390 aa16.96■□□□□ 0.31
ACTN1-209ENST00000553659 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 BTNL10A8MVZ5 291 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 LDHAP00338 332 aaKnown RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 HAPLN1P10915 354 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 TAF6P49848 677 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 POU5F1Q01860 360 aaKnown RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 TAF12Q16514 161 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 IFI16Q16666 785 aaKnown RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 SMYD5Q6GMV2 418 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 LRRTM3Q86VH5 581 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 WDR5BQ86VZ2 330 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 SPPL2BQ8TCT7 592 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 UBXN4Q92575 508 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 GCNAQ96QF7 691 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
ACTN1-209ENST00000553659 STYXL1Q9Y6J8 313 aa16.95■□□□□ 0.3
ACTN1-209ENST00000553659 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-209ENST00000553659 PLEKP08567 350 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-209ENST00000553659 ADRB1P08588 477 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 SOX5P35711 763 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 MXI1P50539 228 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 CDR1P51861 262 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
ACTN1-209ENST00000553659 WSCD1Q658N2 575 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 CEP68Q76N32 757 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 CMTM8Q8IZV2 173 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 FAM160A2Q8N612 972 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-209ENST00000553659 GIPC2Q8TF65 315 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 SMG9Q9H0W8 520 aaKnown RBP16.94■□□□□ 0.3
ACTN1-209ENST00000553659 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 GKN1Q9NS71 199 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 INTUQ9ULD6 942 aa16.94■□□□□ 0.3
ACTN1-209ENST00000553659 KPNA7A9QM74 516 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 TISP43B9A030 160 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 FANCGO15287 622 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 TRIM49P0CI25 452 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 TRIM49CP0CI26 452 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 KRT39Q6A163 491 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-209ENST00000553659 IRF2BP2Q7Z5L9 587 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 DCP1BQ8IZD4 617 aaKnown RBP16.93■□□□□ 0.3
ACTN1-209ENST00000553659 GOLGA1Q92805 767 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 NOX5Q96PH1 765 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 FAM83CQ9BQN1 747 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-209ENST00000553659 TMEM8AQ9HCN3 771 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 DNAJC12Q9UKB3 198 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 JRKLQ9Y4A0 524 aa16.93■□□□□ 0.3
ACTN1-209ENST00000553659 TPRP12270 2363 aaKnown RBP16.93■□□□□ 0.3
ACTN1-209ENST00000553659 CACNA1BQ00975 2339 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 ZNF233A6NK53 670 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 SOBPA7XYQ1 873 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 F8VZ95 297 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 EXTL3O43909 919 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 TADA3O75528 432 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 F11P03951 625 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 HMGA1P17096 107 aaKnown RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 DDX6P26196 483 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 HOXC13P31276 330 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 CYP27A1Q02318 531 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 GFPT1Q06210 699 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 RUNX3Q13761 415 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 SV2CQ496J9 727 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms