RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TTC8Q8TAM2 541 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TCEAL4Q96EI5 215 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FCRL3Q96P31 734 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PLCD4Q9BRC7 762 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 KIFC3Q9BVG8 833 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TRMT61BQ9BVS5 477 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PDZD7Q9H5P4 517 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CYP4F11Q9HBI6 524 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZNF334Q9HCZ1 680 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PRMT7Q9NVM4 692 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CRIM1Q9NZV1 1036 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 AP4E1Q9UPM8 1137 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TDRD15B5MCY1 1934 aaKnown RBP6.09□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ITPR3Q14573 2671 aa6.09□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ATMQ13315 3056 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NOTCH4Q99466 2003 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CLGNO14967 610 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 N4BP3O15049 544 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PHACTR2O75167 634 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PRKCBP05771 671 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MYL4P12829 197 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PCSK2P16519 638 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 GJA1P17302 382 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PTPN2P17706 415 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ATP2B1P20020 1258 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 BRCC3P46736 316 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RARRES1P49788 294 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CLCNKBP51801 687 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SPIRE1Q08AE8 756 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CDK5R2Q13319 367 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 LRRC32Q14392 662 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ELF2Q15723 593 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CALCRLQ16602 461 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SPRED3Q2MJR0 410 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EARS2Q5JPH6 523 aaKnown RBP6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 DGKKQ5KSL6 1271 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CYP4A22Q5TCH4 519 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EEF1DP3Q658K8 133 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PDZD4Q76G19 769 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SYNPOQ8N3V7 929 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 KCNB2Q92953 911 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZSWIM3Q96MP5 696 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ADPGKQ9BRR6 497 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FZD8Q9H461 694 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZFP14Q9HCL3 533 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 POLD4Q9HCU8 107 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ANKEF1Q9NU02 776 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MTRRQ9UBK8 725 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CYP46A1Q9Y6A2 500 aa6.08□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SPAG17Q6Q759 2223 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PCNX2A6NKB5 2137 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PTPRQQ9UMZ3 2332 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TEX51A0A1B0GUA7 166 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 WDR27A2RRH5 827 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLC38A8A6NNN8 435 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZNF263O14978 683 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TRAPPC3O43617 180 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLC28A2O43868 658 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CDKL5O76039 1030 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RHOBTB1O94844 696 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FAM87AP0C7U9 286 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FTH1P19P0C7X4 201 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 HARSP12081 509 aaKnown RBP6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 XBP1P17861 261 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PSMC3P17980 439 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CCR2P41597 374 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MAPK8P45983 427 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 GRIA4P48058 902 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SOX9P48436 509 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 KPNA1P52294 538 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 OSTNP61366 133 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ROR1Q01973 937 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 POU5F1BQ06416 359 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EHHADHQ08426 723 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TEAD2Q15562 447 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NAB2Q15742 525 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MAPK6Q16659 721 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ANKS3Q6ZW76 656 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RUFY3Q7L099 469 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MARCH9Q86YJ5 346 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FMNL3Q8IVF7 1028 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 YAF2Q8IY57 180 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FBXL16Q8N461 479 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 C3orf58Q8NDZ4 430 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 DEPTORQ8TB45 409 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 DEPDC1BQ8WUY9 529 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SMARCD2Q92925 531 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ASB16Q96NS5 453 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NAP1L4Q99733 375 aaKnown RBP6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 HSD17B14Q9BPX1 270 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NFKBIZQ9BYH8 718 aa6.07□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RBCK1Q9BYM8 510 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms