RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 PLA2G2CQ5R387 149 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 LPCAT2Q7L5N7 544 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 CEP57L1Q8IYX8 460 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 CXorf38Q8TB03 319 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 PIGKQ92643 395 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 CNOT6LQ96LI5 555 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 C8orf48Q96LL4 319 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 MAGEF1Q9HAY2 307 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 MTMR6Q9Y217 621 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TCRBV21S2A2A0A5A6 115 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 CLDN5O00501 218 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 CUTAO60888 179 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 TACC1O75410 805 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 KAT7O95251 611 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 KCNK5O95279 499 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 OPRD1P41143 372 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 ATXN3P54252 364 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 EMP3P54852 163 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 MYL6P60660 151 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 SNRPFP62306 86 aaKnown RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 SLC7A9P82251 487 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 MRPS21P82921 87 aaKnown RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 GOLGA8FQ08AF8 430 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 GOLGA8DPQ0D2H9 430 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 FOXC1Q12948 553 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 PSMD6Q15008 389 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 HECTD3Q5T447 861 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 PMS2CLQ68D20 193 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 UNC13DQ70J99 1090 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 TRMT11Q7Z4G4 463 aaKnown RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 NUP93Q8N1F7 819 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 MDGA1Q8NFP4 955 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 GOLGA5Q8TBA6 731 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 SMARCD1Q96GM5 515 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 TNIP3Q96KP6 325 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 TTLL2Q9BWV7 592 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 NUSAP1Q9BXS6 441 aaKnown RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 DNAI2Q9GZS0 605 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 BLZF1Q9H2G9 400 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 SMYD3Q9H7B4 428 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 DMAP1Q9NPF5 467 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 EXOC1Q9NV70 894 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 KBTBD4Q9NVX7 518 aa10.52□□□□□ -0.73
ACTN1-208ENST00000553370 ANKRD11Q6UB99 2663 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-208ENST00000553370 LNP1A1A4G5 178 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 TBC1D3BA6NDS4 549 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 K7EQS6 105 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 POLR2DO15514 142 aaKnown RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 PPP6R2O75170 966 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 YEATS4O95619 227 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 CFIP05156 583 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 BCKDHBP21953 392 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 ATICP31939 592 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 GRIA2P42262 883 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 DPP6P42658 865 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 AFMP43652 599 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 MAPK8P45983 427 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 SLC6A11P48066 632 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 GAD2Q05329 585 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 LMAN2Q12907 356 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 CRY1Q16526 586 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 HSF5Q4G112 596 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 SH3PXD2AQ5TCZ1 1133 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 SDE2Q6IQ49 451 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 FAM35AQ86V20 835 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 NAT16Q8N8M0 369 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 LINC00301Q8NCQ3 95 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 EZH1Q92800 747 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 JAKMIP2Q96AA8 810 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 SLC4A5Q9BY07 1137 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 B3GNT5Q9BYG0 378 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 SLC39A2Q9NP94 309 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 MORC2Q9Y6X9 1032 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-208ENST00000553370 KNL1Q8NG31 2342 aa10.51□□□□□ -0.73
ACTN1-208ENST00000553370 TP53BP1Q12888 1972 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 AKAP13Q12802 2813 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms