RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ADGRG2Q8IZP9 1017 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 PPM1KQ8N3J5 372 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 JAKMIP2Q96AA8 810 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 KLF16Q9BXK1 252 aaPredicted RBP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 SIX2Q9NPC8 291 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 SMPD4Q9NXE4 827 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 A0A1W2PQH9 124 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 XPO1O14980 1071 aaKnown RBP20.32■□□□□ 0.84
PTCH1-227ENST00000553256 NCAM2O15394 837 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 TLR5O60602 858 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 CALCAP01258 141 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 SP9P0CG40 484 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 TRIM21P19474 475 aaKnown RBP20.32■□□□□ 0.84
PTCH1-227ENST00000553256 SLC9A1P19634 815 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 APBA1Q02410 837 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 CETN1Q12798 172 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 PON2Q15165 354 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 GOLGA7BQ2TAP0 167 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 SGO2Q562F6 1265 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 SLC35F5Q8WV83 523 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 IER2Q9BTL4 223 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 TLR8Q9NR97 1041 aaKnown RBP20.32■□□□□ 0.84
PTCH1-227ENST00000553256 RBM12Q9NTZ6 932 aaKnown RBP20.32■□□□□ 0.84
PTCH1-227ENST00000553256 C2orf42Q9NWW7 574 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 CLIC5Q9NZA1 410 aa20.32■□□□□ 0.84
PTCH1-227ENST00000553256 FANCMQ8IYD8 2048 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 E2F8A0AVK6 867 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 BECN2A8MW95 431 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 ABL1P00519 1130 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 MBL2P11226 248 aaPredicted RBP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 PLA2G4AP47712 749 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 RPL34P49207 117 aaKnown RBP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 CNGA2Q16280 664 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 ZNF528Q3MIS6 628 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 SMYD5Q6GMV2 418 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 CC2D1AQ6P1N0 951 aaPredicted RBP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 KCTD13Q8WZ19 329 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 ATOH1Q92858 354 aaPredicted RBP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 ATP2A3Q93084 1043 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 CRACR2AQ9BSW2 395 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 SAMSN1Q9NSI8 373 aaKnown RBP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 CFAP97Q9P2B7 532 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 FBXO4Q9UKT5 387 aa20.31■□□□□ 0.84
PTCH1-227ENST00000553256 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.31■□□□□ 0.84
PTCH1-227ENST00000553256 MYH10P35580 1976 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 PAPSS2O95340 614 aaPredicted RBP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 CYP17A1P05093 508 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 PON1P27169 355 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 OPRD1P41143 372 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 BCAT1P54687 386 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 BST2Q10589 180 aaKnown RBP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 DGKKQ5KSL6 1271 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 GJB7Q6PEY0 223 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 RHBDF2Q6PJF5 856 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 Q6ZS52 159 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 DDX42Q86XP3 938 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 SCML4Q8N228 414 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 RBBP8NLQ8NC74 664 aaPredicted RBP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 ENOX1Q8TC92 643 aaKnown RBP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 DNAI2Q9GZS0 605 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 AJAP1Q9UKB5 411 aaPredicted RBP20.3■□□□□ 0.84
PTCH1-227ENST00000553256 PCDHB4Q9Y5E5 795 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 GPR179Q6PRD1 2367 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 WDR87Q6ZQQ6 2873 aa20.3■□□□□ 0.84
PTCH1-227ENST00000553256 MYO16Q9Y6X6 1858 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 RARGP13631 454 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 IFNAR2P48551 515 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 GALK1P51570 392 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 MAN2A1Q16706 1144 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 CDKAL1Q5VV42 579 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 PKN3Q6P5Z2 889 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 HTR3DQ70Z44 454 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 SYNPOQ8N3V7 929 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 CPA6Q8N4T0 437 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 UBA3Q8TBC4 463 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 P2RY11Q96G91 374 aa20.29■□□□□ 0.84
PTCH1-227ENST00000553256 SPATA6Q9NWH7 488 aaPredicted RBP20.29■□□□□ 0.84
PTCH1-227ENST00000553256 RIF1Q5UIP0 2472 aaKnown RBP20.28■□□□□ 0.84
PTCH1-227ENST00000553256 SCAMP3O14828 347 aaKnown RBP20.28■□□□□ 0.84
PTCH1-227ENST00000553256 SETSIPP0DME0 302 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 CD19P15391 556 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
PTCH1-227ENST00000553256 PSEN1P49768 467 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 MRE11P49959 708 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 TKTL1P51854 596 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 MESP2Q0VG99 397 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 KCNMA1Q12791 1236 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 DHCR24Q15392 516 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 PMF1Q6P1K2 205 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 GBP6Q6ZN66 633 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 Q6ZNB5 142 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 SPEM1Q8N4L4 309 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 ZBTB44Q8NCP5 570 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 SHC3Q92529 594 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 NDRG1Q92597 394 aaKnown RBP20.28■□□□□ 0.84
PTCH1-227ENST00000553256 UBE2TQ9NPD8 197 aaPredicted RBP20.28■□□□□ 0.84
PTCH1-227ENST00000553256 APEX2Q9UBZ4 518 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 DACH1Q9UI36 760 aa20.28■□□□□ 0.84
PTCH1-227ENST00000553256 NUDT5Q9UKK9 219 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms