RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ERMNQ8TAM6 284 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-205ENST00000553192 ACBD6Q9BR61 282 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 TRIM9Q9C026 710 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 TBC1D14Q9P2M4 693 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
SNRPF-205ENST00000553192 KIAA1024Q9UPX6 916 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 KPNA7A9QM74 516 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 KRT38O76015 456 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 LDOC1O95751 146 aaPredicted RBP12.57□□□□□ -0.4
SNRPF-205ENST00000553192 CDK4P11802 303 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 CTSKP43235 329 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 BROXQ5VW32 411 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 SCARA3Q6AZY7 606 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
SNRPF-205ENST00000553192 C1orf186Q6ZWK4 172 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 OSTM1Q86WC4 334 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 BBS7Q8IWZ6 715 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 CD302Q8IX05 232 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 CACTIN-AS1Q8N1I8 211 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 WBP2Q969T9 261 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 CNDP2Q96KP4 475 aaKnown RBP12.57□□□□□ -0.4
SNRPF-205ENST00000553192 TTLL2Q9BWV7 592 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 TM9SF3Q9HD45 589 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 OSGEPQ9NPF4 335 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
SNRPF-205ENST00000553192 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
SNRPF-205ENST00000553192 LRWD1Q9UFC0 647 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 TMEM131Q92545 1883 aa12.57□□□□□ -0.4
SNRPF-205ENST00000553192 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 E9PMD0 336 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 GFRA2O00451 464 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 OGTO15294 1046 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 XBP1P17861 261 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 GLDCP23378 1020 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 CDC25AP30304 524 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 MAGEA11P43364 429 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 GRIA4P48058 902 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 PCBP4P57723 403 aaKnown RBP12.56□□□□□ -0.4
SNRPF-205ENST00000553192 NFKB2Q00653 900 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 SHBQ15464 509 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 ANO4Q32M45 955 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 PRAMEF14Q5SWL7 426 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 GRAMD4Q6IC98 578 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 RINT1Q6NUQ1 792 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
SNRPF-205ENST00000553192 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
SNRPF-205ENST00000553192 DCBLD1Q8N8Z6 715 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 EXD3Q8N9H8 876 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 RFFLQ8WZ73 363 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 OTUB2Q96DC9 234 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 FUBP3Q96I24 572 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNRPF-205ENST00000553192 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 C6orf106Q9H6K1 298 aaPredicted RBP12.56□□□□□ -0.4
SNRPF-205ENST00000553192 SPHK2Q9NRA0 654 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 DERAQ9Y315 318 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 PCDHB6Q9Y5E3 794 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 STON1Q9Y6Q2 735 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 MYLKQ15746 1914 aa12.56□□□□□ -0.4
SNRPF-205ENST00000553192 MBL2P11226 248 aaPredicted RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 OXTRP30559 389 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 MCM7P33993 719 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 TEAD4Q15561 434 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 KYAT1Q16773 422 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 FAM171BQ6P995 826 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 TMPRSS6Q8IU80 811 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 FAM117AQ9C073 453 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 CLCA2Q9UQC9 943 aa12.55□□□□□ -0.4
SNRPF-205ENST00000553192 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 HEMK1Q9Y5R4 338 aaPredicted RBP12.55□□□□□ -0.4
SNRPF-205ENST00000553192 BOD1L1Q8NFC6 3051 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 USP9YO00507 2555 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 A0A0B4J269 797 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 K7ENP7 123 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 KLK10O43240 276 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 CACNG3O60359 315 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 ATP2C2O75185 946 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 CTDNEP1O95476 244 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 CISD3P0C7P0 127 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 PLS3P13797 630 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 INSM1Q01101 510 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms