RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 CPA2P48052 419 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 SULT1E1P49888 294 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 SCNN1GP51170 649 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 AP3M2P53677 418 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 DRG2P55039 364 aaKnown RBP5.83□□□□□ -1.48
LIMA1-215ENST00000552823 ARL4CP56559 192 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 CLDN10P78369 228 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 ZBTB16Q05516 673 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 RNASELQ05823 741 aaKnown RBP5.83□□□□□ -1.48
LIMA1-215ENST00000552823 FAAP100Q0VG06 881 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 DPYSL3Q14195 570 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 DUSP28Q4G0W2 176 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 MAMDC4Q6UXC1 1216 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
LIMA1-215ENST00000552823 PIGZQ86VD9 579 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 KCNV2Q8TDN2 545 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 PRCCQ92733 491 aaPredicted RBP5.83□□□□□ -1.48
LIMA1-215ENST00000552823 PPP1R36Q96LQ0 422 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 FAM111AQ96PZ2 611 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 TBCBQ99426 244 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 NPHS2Q9NP85 383 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 SLC17A7Q9P2U7 560 aa5.83□□□□□ -1.48
LIMA1-215ENST00000552823 A0A1B0GUA9 196 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 A8MUI8 341 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 M0QYT0 321 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ATP9BO43861 1147 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 CDH16O75309 829 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MT-ND3P03897 115 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 OR4Q2P0C623 313 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 USP17L7P0C7H9 530 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 CYP2F1P24903 491 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 KLRC2P26717 231 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 HNRNPH1P31943 449 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MMP13P45452 471 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PSEN2P49810 448 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 WDR4P57081 412 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SLC25A11Q02978 314 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 CLUL1Q15846 466 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 KBTBD12Q3ZCT8 623 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 FBXO47Q5MNV8 452 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SYPL2Q5VXT5 272 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 RWDD4Q6NW29 188 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 C16orf46Q6P387 395 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 NOTUMQ6P988 496 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ZCCHC23Q6ZST2 131 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 OSTM1Q86WC4 334 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SCN4BQ8IWT1 228 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SIX6OS1Q8N1H7 587 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 APPL2Q8NEU8 664 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PPTC7Q8NI37 304 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SLC7A14Q8TBB6 771 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 LRRC8CQ8TDW0 803 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 VCPIP1Q96JH7 1222 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 TMEM237Q96Q45 408 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PAFAH2Q99487 392 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MECRQ9BV79 373 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SHCBP1LQ9BZQ2 653 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 IQCGQ9H095 443 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 STMN4Q9H169 189 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ETNK1Q9HBU6 452 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PRG3Q9Y2Y8 225 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ATAD5Q96QE3 1844 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 FER1L6Q2WGJ9 1857 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 GON4LQ3T8J9 2241 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 IQCA1LA6NCM1 817 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 KPNA7A9QM74 516 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 H0Y3Z8 333 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 APOL1O14791 398 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 RPS6KA5O75582 802 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 GABBR2O75899 941 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 B3GAT3O94766 335 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 TKTP29401 623 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MAN1A1P33908 653 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 RDXP35241 583 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 THPOP40225 353 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SCTRP47872 440 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 GPX6P59796 221 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 KCNJ2P63252 427 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SNX17Q15036 470 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SPRYD7Q5W111 196 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SLC27A1Q6PCB7 646 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 TRMT10BQ6PF06 316 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 RHBDF2Q6PJF5 856 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 KCNT2Q6UVM3 1135 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 LRRC6Q86X45 466 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MPP5Q8N3R9 675 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PCDH19Q8TAB3 1148 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MOCOSQ96EN8 888 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 RMDN2Q96LZ7 410 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 PARK7Q99497 189 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 CNPY3Q9BT09 278 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 ATXN3LQ9H3M9 355 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 CNOT10Q9H9A5 744 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 SLC40A1Q9NP59 571 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 VTA1Q9NP79 307 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 TMEM51Q9NW97 253 aa5.82□□□□□ -1.48
LIMA1-215ENST00000552823 TNS1Q9HBL0 1735 aaKnown RBP5.82□□□□□ -1.48
LIMA1-215ENST00000552823 MYBPHLA2RUH7 354 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms