RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 C9orf57Q5W0N0 161 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 SPOPLQ6IQ16 392 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 LLGL2Q6P1M3 1020 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.62□□□□□ -1.03
BEST3-211ENST00000552295 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 ARMCX6Q7L4S7 300 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 CCDC186Q7Z3E2 898 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 RPUSD2Q8IZ73 545 aaKnown RBP8.62□□□□□ -1.03
BEST3-211ENST00000552295 BADQ92934 168 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 KIRREL1Q96J84 757 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 NT5C1BQ96P26 610 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 CARS2Q9HA77 564 aaKnown RBP8.62□□□□□ -1.03
BEST3-211ENST00000552295 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
BEST3-211ENST00000552295 NLRC4Q9NPP4 1024 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 SLC38A7Q9NVC3 462 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 DCTN4Q9UJW0 460 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 DNAJC12Q9UKB3 198 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 PPM1HQ9ULR3 514 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 AGAP1Q9UPQ3 857 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 INPP5FQ9Y2H2 1132 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
BEST3-211ENST00000552295 DAAM1Q9Y4D1 1078 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 NUB1Q9Y5A7 615 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 PCDHB7Q9Y5E2 793 aa8.62□□□□□ -1.03
BEST3-211ENST00000552295 TSC2P49815 1807 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 KIAA1671Q9BY89 1806 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 LRRC53A6NM62 1247 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 PIRO00625 290 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 EFCAB14O75071 495 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 BAIAP3O94812 1187 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 LRIG2O94898 1065 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 POMCP01189 267 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 TPM1P09493 284 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 SYN1P17600 705 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 ATICP31939 592 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 KRT9P35527 623 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 GATMP50440 423 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 EPHB4P54760 987 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 DEFB103AP81534 67 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 GCNT1Q02742 428 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 DSC1Q08554 894 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 DRAP1Q14919 205 aaPredicted RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 ZNF699Q32M78 642 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 NOMO2Q5JPE7 1267 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 PDXDC1Q6P996 788 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 RRAGAQ7L523 313 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CILP2Q8IUL8 1156 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CNGA4Q8IV77 575 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CCDC150Q8NCX0 1101 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 TAF4BQ92750 862 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 KAT5Q92993 513 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 KREMEN1Q96MU8 473 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CASD1Q96PB1 797 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 DNAJC7Q99615 494 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 STK33Q9BYT3 514 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 IMPG2Q9BZV3 1241 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 GPR88Q9GZN0 384 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 UBE2TQ9NPD8 197 aaPredicted RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 ABHD10Q9NUJ1 306 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 CACNG4Q9UBN1 327 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 ZMYND8Q9ULU4 1186 aaPredicted RBP8.61□□□□□ -1.03
BEST3-211ENST00000552295 MYO6Q9UM54 1294 aa8.61□□□□□ -1.03
BEST3-211ENST00000552295 F8VZ95 297 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 B4GALT3O60512 393 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 PAGE1O75459 146 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 AMHP03971 560 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 TBXAS1P24557 533 aaPredicted RBP8.6□□□□□ -1.03
BEST3-211ENST00000552295 HNRNPH3P31942 346 aaKnown RBP8.6□□□□□ -1.03
BEST3-211ENST00000552295 MFAP3P55082 362 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 PDE4CQ08493 712 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 TUSC3Q13454 348 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 CUL2Q13617 745 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 RAPGEF1Q13905 1077 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 WDR72Q3MJ13 1102 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 ZNF667Q5HYK9 610 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 SYDE1Q6ZW31 735 aaPredicted RBP8.6□□□□□ -1.03
BEST3-211ENST00000552295 ZNF365Q70YC5 407 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 ENOSF1Q7L5Y1 443 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 ZNF280BQ86YH2 543 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 TMEM139Q8IV31 216 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 LRRC8AQ8IWT6 810 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 UBR7Q8N806 425 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 ZNF397Q8NF99 534 aaPredicted RBP8.6□□□□□ -1.03
BEST3-211ENST00000552295 OR8K1Q8NGG5 319 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 SHC3Q92529 594 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 TOP1MTQ969P6 601 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 HPDLQ96IR7 371 aa8.6□□□□□ -1.03
BEST3-211ENST00000552295 FAM81BQ96LP2 452 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms