RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TSHZ3Q63HK5 1081 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 NAIF1Q69YI7 327 aaPredicted RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ANO7Q6IWH7 933 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 RINLQ6ZS11 566 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 PIK3AP1Q6ZUJ8 805 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 HTR3DQ70Z44 454 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 GALNT5Q7Z7M9 940 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 SPARTQ8N0X7 666 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 GALNT4Q8N4A0 578 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 LRRC71Q8N4P6 559 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 LINC01356Q8N9X3 169 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 TBC1D22AQ8WUA7 517 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 KTI12Q96EK9 354 aaPredicted RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 MCRS1Q96EZ8 462 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ZBTB45Q96K62 511 aaPredicted RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 HIST1H2AAQ96QV6 131 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 MPHOSPH9Q99550 1183 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 CENPOQ9BU64 300 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 BRD8Q9H0E9 1235 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 UNKLQ9H9P5 680 aaKnown RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ARHGAP26Q9UNA1 814 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 USP22Q9UPT9 525 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 TTLL3Q9Y4R7 772 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 LOC105369274A0A096LPK9 316 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 FSD2A1L4K1 749 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 SAC3D1A6NKF1 404 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 SLC38A8A6NNN8 435 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ZAR1LA6NP61 321 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 LEFTY2O00292 366 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 DOK2O60496 412 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 TSPAN3O60637 253 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 TMCC2O75069 709 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ZBED4O75132 1171 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 IPO13O94829 963 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 LARGE1O95461 756 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ITGALP20701 1170 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RBL1P28749 1068 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RPS19P39019 145 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 KCNC1P48547 511 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CLNS1AP54105 237 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 PRKAG1P54619 331 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 EPHB4P54760 987 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 JAG1P78504 1218 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 KIAA2012Q0VF49 1180 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 E2F2Q14209 437 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ERV3-1Q14264 604 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CSHL1Q14406 222 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CLCA4Q14CN2 919 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RPS6KA2Q15349 733 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ELAVL1Q15717 326 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 TSTQ16762 297 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 PRICKLE4Q2TBC4 344 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ZNF484Q5JVG2 852 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 HAUS3Q68CZ6 603 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RGS7BPQ6MZT1 257 aaPredicted RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 SLC15A3Q8IY34 581 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 OR4N4Q8N0Y3 316 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 OR56A1Q8NGH5 318 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CREB3L4Q8TEY5 395 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 TMEM171Q8WVE6 324 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 TMEM176AQ96HP8 235 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 PHACTR3Q96KR7 559 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 LMF1Q96S06 567 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ZCWPW1Q9H0M4 648 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 MEGF9Q9H1U4 602 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 PRKRIP1Q9H875 184 aaPredicted RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 IL21RQ9HBE5 538 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RXFP3Q9NSD7 469 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 NSMCE4AQ9NXX6 385 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 PLA2G3Q9NZ20 509 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ORC3Q9UBD5 711 aaPredicted RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 RIMKLBQ9ULI2 386 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CNOT6Q9ULM6 557 aaKnown RBP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 GPR34Q9UPC5 381 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 CNPY2Q9Y2B0 182 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 ZBTB1Q9Y2K1 713 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 SLC27A6Q9Y2P4 619 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 NEU2Q9Y3R4 380 aa4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.56□□□□□ -1.68
LSM6P2-201ENST00000552208 A0A1B0GTW7 788 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 A0A1W2PS29 197 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 PI4KAP2A4QPH2 592 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 TCERG1O14776 1098 aaKnown RBP4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 SPTLC2O15270 562 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 CTIFO43310 598 aaKnown RBP4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 ORC4O43929 436 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 MFAP3LO75121 409 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 ZFPL1O95159 310 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 TAL1P17542 331 aaPredicted RBP4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 FGFR4P22455 802 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 RRM1P23921 792 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 ABCD3P28288 659 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 RBM5P52756 815 aaKnown RBP eCLIP4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 RABGGTBP53611 331 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 SLURP1P55000 103 aa4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 DRG2P55039 364 aaKnown RBP4.55□□□□□ -1.68
LSM6P2-201ENST00000552208 TIRAPP58753 221 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms