RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 LAMTOR5O43504 91 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PI15O43692 258 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 LRRN2O75325 713 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PRAMEF12O95522 483 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 VDRP11473 427 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 KRT5P13647 590 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 GLULP15104 373 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 NPR3P17342 541 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ACO1P21399 889 aaKnown RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 MAGEA9P43362 315 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 SLC5A3P53794 718 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 CACNA2D1P54289 1103 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 GOLGA8FQ08AF8 430 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 GOLGA8DPQ0D2H9 430 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 FCHO2Q0JRZ9 810 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 RUNX3Q13761 415 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 LRRC32Q14392 662 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ZNF268Q14587 947 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 MTF1Q14872 753 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PDGFRLQ15198 375 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ITPRIPL2Q3MIP1 535 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 HECTD3Q5T447 861 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PPP1R26Q5T8A7 1209 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 CWF19L1Q69YN2 538 aaKnown RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TMEM270Q6UE05 265 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 GBP6Q6ZN66 633 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 LIAT1Q6ZQX7 453 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 CLEC17AQ6ZS10 378 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PAQR9Q6ZVX9 377 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 RRAGAQ7L523 313 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TMEM150AQ86TG1 271 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 DDX42Q86XP3 938 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TRIM59Q8IWR1 403 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 CPA6Q8N4T0 437 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ANKRD20A12PQ8NF67 263 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 PJA1Q8NG27 643 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 SH3RF2Q8TEC5 729 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 OVCA2Q8WZ82 227 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 USP13Q92995 863 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 CCDC97Q96F63 343 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ZFYVE19Q96K21 471 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 FAM81BQ96LP2 452 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TWNKQ96RR1 684 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 SMOQ99835 787 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TTLL2Q9BWV7 592 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 DUSP16Q9BY84 665 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 OSBPL6Q9BZF3 934 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 LTB4R2Q9NPC1 389 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 UBE2TQ9NPD8 197 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 TRPV5Q9NQA5 729 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ANO10Q9NW15 660 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 SPATA6Q9NWH7 488 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 DUS2Q9NX74 493 aaKnown RBP6.23□□□□□ -1.41
CCDC65-204ENST00000552188 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 KIAA1257Q9ULG3 409 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 SH3BP1Q9Y3L3 701 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
CCDC65-204ENST00000552188 ZNF840PA6NDX5 716 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SPECC1L-ADORA2AF8WAN1 911 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 LEFTY2O00292 366 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SLC9A3R1O14745 358 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 PMM2O15305 246 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 TADA3O75528 432 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 BEST1O76090 585 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 NFATC1O95644 943 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 IRF1P10914 325 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 RALAP11233 206 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 ERCC5P28715 1186 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 ATP5C1P36542 298 aaKnown RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 USP8P40818 1118 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SOX9P48436 509 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 BCAT1P54687 386 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 RAD23BP54727 409 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 MFAP3P55082 362 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 MARSP56192 900 aaKnown RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 MCCD1P59942 119 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 TNK2Q07912 1038 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 BST2Q10589 180 aaKnown RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 STILQ15468 1287 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 MAN2A1Q16706 1144 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 ARHGAP44Q17R89 818 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 EXOC3L4Q17RC7 722 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 GOLGA7BQ2TAP0 167 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 DPCR1Q3MIW9 517 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 HSP90AA4PQ58FG1 418 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 CT47A1Q5JQC4 288 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 CLEC20AQ6ZU45 233 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 RSRC2Q7L4I2 434 aaKnown RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 ENOSF1Q7L5Y1 443 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 TADA2BQ86TJ2 420 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 RALGPS2Q86X27 583 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-204ENST00000552188 CCDC105Q8IYK2 499 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SIX6OS1Q8N1H7 587 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 ARHGAP18Q8N392 663 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SLC4A11Q8NBS3 891 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 PRSS33Q8NF86 280 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 SCAMP5Q8TAC9 235 aa6.22□□□□□ -1.41
CCDC65-204ENST00000552188 WHAMMQ8TF30 809 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms