RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CHMP4B	Q9H444	224 aa	Known RBP	6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KIF9	Q9HAQ2	790 aa		6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	LRRC4C	Q9HCJ2	640 aa		6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SEPT3	Q9UH03	358 aa		6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SNX11	Q9Y5W9	270 aa		6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SPEN	Q96T58	3664 aa	Known RBP	6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ZFHX3	Q15911	3703 aa		6.42	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SVIL	O95425	2214 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260		A0A087WWV3	80 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	LRRIQ4	A6NIV6	560 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SHISA8	B8ZZ34	492 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260		K7ENP7	123 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ENC1	O14682	589 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	BCAT2	O15382	392 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	RFPL3	O75679	317 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KAT7	O95251	611 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TDP2	O95551	362 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CYP17A1	P05093	508 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	YWHAB	P31946	246 aa	Known RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TNFSF9	P41273	254 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GRK6	P43250	576 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	OSTN	P61366	133 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	POU5F1B	Q06416	359 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CTTN	Q14247	550 aa	Known RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KIF19	Q2TAC6	998 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KCNT1	Q5JUK3	1230 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	WDR45B	Q5MNZ6	344 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	INO80C	Q6PI98	192 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KDM7A	Q6ZMT4	941 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MAEA	Q7L5Y9	396 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TICAM2	Q86XR7	235 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GATAD2A	Q86YP4	633 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MIB1	Q86YT6	1006 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	DHX40	Q8IX18	779 aa	Known RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	EXOC8	Q8IYI6	725 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ETNPPL	Q8TBG4	499 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KCNE4	Q8WWG9	221 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	DNASE2B	Q8WZ79	361 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CCDC97	Q96F63	343 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GPR174	Q9BXC1	333 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	NFKBIZ	Q9BYH8	718 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	POLR3F	Q9H1D9	316 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TRPC7	Q9HCX4	862 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GPRC5C	Q9NQ84	441 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	RGL1	Q9NZL6	768 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	PLEKHB1	Q9UF11	243 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KLF15	Q9UIH9	416 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GDF2	Q9UK05	429 aa	Predicted RBP	6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	PCDHB1	Q9Y5F3	818 aa		6.41	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SCN8A	Q9UQD0	1980 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260		A0A1W2PQF6	199 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260		H0Y8X5	98 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TADA3	O75528	432 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	LDOC1	O95751	146 aa	Predicted RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	APOD	P05090	189 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MPO	P05164	745 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	FAM87A	P0C7U9	286 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ARAF	P10398	606 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	NCAM1	P13591	858 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	HOXB2	P14652	356 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	HMGA1	P17096	107 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GLDC	P23378	1020 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MARCKS	P29966	332 aa	Predicted RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GPR15	P49685	360 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ACADVL	P49748	655 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ZXDB	P98169	803 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	YWHAH	Q04917	246 aa	Predicted RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	FAM160A1	Q05DH4	1040 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	KCNMA1	Q12791	1236 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SFSWAP	Q12872	951 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	PRPF4B	Q13523	1007 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ZNF268	Q14587	947 aa	Predicted RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	VEPH1	Q14D04	833 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SUZ12	Q15022	739 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MGAT5B	Q3V5L5	792 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	DCAF12L1	Q5VU92	463 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SDHAF4	Q5VUM1	108 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CASC1	Q6TDU7	716 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	IL27RA	Q6UWB1	636 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ALKAL1	Q6UXT8	129 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	MON1A	Q86VX9	555 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TEX2	Q8IWB9	1127 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	FAM26E	Q8N5C1	309 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	APPL2	Q8NEU8	664 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	SH3RF2	Q8TEC5	729 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	LRRC15	Q8TF66	581 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TOE1	Q96GM8	510 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	DYDC2	Q96IM9	177 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CNDP2	Q96KP4	475 aa	Known RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	PNKP	Q96T60	521 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ACOX2	Q99424	681 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ADPGK	Q9BRR6	497 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	LXN	Q9BS40	222 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ZMYND12	Q9H0C1	365 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	GLT8D2	Q9H1C3	349 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	CD248	Q9HCU0	757 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	ARHGEF4	Q9NR80	690 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	PRMT7	Q9NVM4	692 aa	Predicted RBP	6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	TUBGCP4	Q9UGJ1	667 aa		6.4	□□□□□ -1.38
RACGAP1-223	ENST00000551260	EIF2B4	Q9UI10	523 aa	Known RBP	6.4	□□□□□ -1.38

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