RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 TGM3Q08188 693 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SLC22A9Q8IVM8 553 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 MYO1HQ8N1T3 1032 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 DEPDC7Q96QD5 511 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 CKBP12277 381 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 LHX1P48742 406 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 CDC16Q13042 620 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 NAA30Q147X3 362 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 TRIM71Q2Q1W2 868 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 MTA1Q13330 715 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 PLD1Q13393 1074 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 PDIA6Q15084 440 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 CARNMT1Q8N4J0 409 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 ANKRD49Q8WVL7 239 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 WBP4O75554 376 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 THP07101 528 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 PCNAP12004 261 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 EPC2Q52LR7 807 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 GPR141Q7Z602 305 aa12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 YME1L1Q96TA2 773 aa12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 PABPC3Q9H361 631 aaKnown RBP12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 PAPOLBQ9NRJ5 636 aaKnown RBP12.9□□□□□ -0.35
RAB3IP-212ENST00000550536 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 HPGDP15428 266 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 NLRP9Q7RTR0 991 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 STRA8Q7Z7C7 330 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 TUBGCP3Q96CW5 907 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 MICU2Q8IYU8 434 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 MED8Q96G25 268 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 STMN3Q9NZ72 180 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 OGTO15294 1046 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PLA2G6O60733 806 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PWP1Q13610 501 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 MROH8Q9H579 483 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PNMA8BQ9ULN7 279 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 ATP6AP1LQ52LC2 224 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 KANSL1LA0AUZ9 987 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 SYNCRIPO60506 623 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PSMC3P17980 439 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 MBL2P11226 248 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 ZNF23P17027 643 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 SERPINB3P29508 390 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 GPC1P35052 558 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 EPHB3P54753 998 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 EFCAB1Q9HAE3 211 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 CTNNAL1Q9UBT7 734 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 CASP10Q92851 521 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 RPS6KB2Q9UBS0 482 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 PADI4Q9UM07 663 aa12.89□□□□□ -0.35
RAB3IP-212ENST00000550536 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CKMP06732 381 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ZNF286BP0CG31 522 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ACADSP16219 412 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CHRNB3Q05901 458 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 SLC47A2Q86VL8 602 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 MIEF1Q9NQG6 463 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 BMP10O95393 424 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CSF1RP07333 972 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 FCGR1AP12314 374 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CCDC3Q9BQI4 270 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 DYRK1BQ9Y463 629 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 RAD54BQ9Y620 910 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 SUPT7LO94864 414 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ATP6V1B1P15313 513 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 NR2C2P49116 596 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 RAB14P61106 215 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms