RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 C18orf25Q96B23 403 aaPredicted RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 TUBB6Q9BUF5 446 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 NXF3Q9H4D5 531 aaKnown RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 CD248Q9HCU0 757 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 TELO2Q9Y4R8 837 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 TAF1P21675 1872 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 CHRNB2P17787 502 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 SOX11P35716 441 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 PGM1P36871 562 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 YWHAHQ04917 246 aaPredicted RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 ARHGEF6Q15052 776 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 C10orf120Q5SQS8 335 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 AP1ARQ63HQ0 302 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 TTC27Q6P3X3 843 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 PLEKHO2Q8TD55 490 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 WWP1Q9H0M0 922 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 TRPC7Q9HCX4 862 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 GPR25O00155 361 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 C4BPAP04003 597 aaKnown RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 AVPR1AP37288 418 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 PDK2Q15119 407 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 WSCD1Q658N2 575 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 FAM183BPQ6ZVS7 135 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 CHSY1Q86X52 802 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 MTMR14Q8NCE2 650 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 LPPQ93052 612 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 LRGUKQ96M69 825 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 CPXM1Q96SM3 734 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 BCAP29Q9UHQ4 241 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 CNTNAP1P78357 1384 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 CUL3Q13618 768 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 SLC26A7Q8TE54 656 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 HEY2Q9UBP5 337 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 PCYOX1Q9UHG3 505 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 BGNP21810 368 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 HNRNPH1P31943 449 aaKnown RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 SCTRP47872 440 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 PSEN2P49810 448 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 ATN1P54259 1190 aaPredicted RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 AUHQ13825 339 aaKnown RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 COLGALT1Q8NBJ5 622 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 CICQ96RK0 1608 aaPredicted RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 ATP5HO75947 161 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 ENDOD1O94919 500 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 PAEPP09466 180 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 RTP1P59025 263 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 YWHAZP63104 245 aaKnown RBP15.54■□□□□ 0.08
CUX1-214ENST00000550008 PTK6Q13882 451 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 ACCSLQ4AC99 568 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 GPR142Q7Z601 462 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 THTPAQ9BU02 230 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 SHOC2Q9UQ13 582 aa15.54■□□□□ 0.08
CUX1-214ENST00000550008 SIGLEC16A6NMB1 481 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 B2RBV5 119 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 CLDN5O00501 218 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 CFHP08603 1231 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TAC1P20366 129 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 MLH1P40692 756 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 ERMARDQ5T6L9 678 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 RGS9BPQ6ZS82 235 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 RIBC1Q8N443 379 aaPredicted RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 KAT2BQ92831 832 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 CFAP73A6NFT4 308 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 FSCN2O14926 492 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 HOXD10P28358 340 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 FSCN1Q16658 493 aaKnown RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 ACAD11Q709F0 780 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 NLRP9Q7RTR0 991 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TAS2R42Q7RTR8 314 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TCP10LQ8TDR4 215 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 SCG3Q8WXD2 468 aaKnown RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 XAB2Q9HCS7 855 aaKnown RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 ADA2Q9NZK5 511 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 NOCTQ9UK39 431 aaKnown RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 CNTNAP2Q9UHC6 1331 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 AGPSO00116 658 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 MAP3K7O43318 606 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 LIASO43766 372 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 USP17L7P0C7H9 530 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 SCNN1GP51170 649 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TFAP2DQ7Z6R9 452 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TMEM192Q8IY95 271 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 TFAP2BQ92481 460 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 RPRD1AQ96P16 312 aaPredicted RBP15.53■□□□□ 0.08
CUX1-214ENST00000550008 DONSONQ9NYP3 566 aa15.53■□□□□ 0.08
CUX1-214ENST00000550008 DGKIO75912 1065 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 S100BP04271 92 aaPredicted RBP15.52■□□□□ 0.08
CUX1-214ENST00000550008 MMP8P22894 467 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 ADRA1DP25100 572 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 RPL22P35268 128 aaKnown RBP15.52■□□□□ 0.08
CUX1-214ENST00000550008 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 CNGA2Q16280 664 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 USP50Q70EL3 339 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms