RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 PXNP49023 591 aaPredicted RBP20.63■□□□□ 0.89
ATF1-202ENST00000549612 PMS1P54277 932 aaKnown RBP20.63■□□□□ 0.89
ATF1-202ENST00000549612 LRRC63Q05C16 580 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 ANKRD40Q6AI12 368 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 RHBDF2Q6PJF5 856 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 PARD6AQ9NPB6 346 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 POLR3BQ9NW08 1133 aaPredicted RBP20.63■□□□□ 0.89
ATF1-202ENST00000549612 DLL3Q9NYJ7 618 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 DNAH14Q0VDD8 3507 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 K7EQS6 105 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 LMNB2Q03252 620 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 CEP68Q76N32 757 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.62■□□□□ 0.89
ATF1-202ENST00000549612 USP33Q8TEY7 942 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 GAB3Q8WWW8 586 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 DUSP16Q9BY84 665 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 CYLDQ9NQC7 956 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 CISHQ9NSE2 258 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 COQ4Q9Y3A0 265 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 SH3BP1Q9Y3L3 701 aa20.62■□□□□ 0.89
ATF1-202ENST00000549612 CYP26A1O43174 497 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 ADH5P11766 374 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 ACO1P21399 889 aaKnown RBP20.61■□□□□ 0.89
ATF1-202ENST00000549612 KIF11P52732 1056 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 DMC1Q14565 340 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 PUM1Q14671 1186 aaKnown RBP eCLIP20.61■□□□□ 0.89
ATF1-202ENST00000549612 CBWD6Q4V339 395 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 DCAF17Q5H9S7 520 aaPredicted RBP20.61■□□□□ 0.89
ATF1-202ENST00000549612 CBWD3Q5JTY5 395 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 CBWD5Q5RIA9 395 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 PPP1R26Q5T8A7 1209 aaPredicted RBP20.61■□□□□ 0.89
ATF1-202ENST00000549612 FAM160A2Q8N612 972 aaPredicted RBP20.61■□□□□ 0.89
ATF1-202ENST00000549612 JAKMIP2Q96AA8 810 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 HHIPQ96QV1 700 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 ARID3AQ99856 593 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 NACA2Q9H009 215 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 OSER1Q9NX31 292 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 USP18Q9UMW8 372 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 KIAA1549LQ6ZVL6 1849 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 ATG2BQ96BY7 2078 aa20.61■□□□□ 0.89
ATF1-202ENST00000549612 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 PRR5-ARHGAP8B1AHC4 643 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 PSMA7O14818 248 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 RPP40O75818 363 aaKnown RBP20.6■□□□□ 0.89
ATF1-202ENST00000549612 APBB3O95704 486 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 ARHGAP8P85298 464 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 SPEM2Q0P670 501 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 RSPO4Q2I0M5 234 aaPredicted RBP20.6■□□□□ 0.89
ATF1-202ENST00000549612 ZNF394Q53GI3 561 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 LY6G5CQ5SRR4 150 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 TCERG1LQ5VWI1 586 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 KLHDC10Q6PID8 442 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 C12orf40Q86WS4 652 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 BBS7Q8IWZ6 715 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 SLC4A11Q8NBS3 891 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 WBP2Q969T9 261 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 SLC35C1Q96A29 364 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 TMEM176AQ96HP8 235 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 HEXIM2Q96MH2 286 aaKnown RBP20.6■□□□□ 0.89
ATF1-202ENST00000549612 PNKPQ96T60 521 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 KLF16Q9BXK1 252 aaPredicted RBP20.6■□□□□ 0.89
ATF1-202ENST00000549612 ARMCX3Q9UH62 379 aaPredicted RBP20.6■□□□□ 0.89
ATF1-202ENST00000549612 EBF1Q9UH73 591 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 MYO16Q9Y6X6 1858 aa20.6■□□□□ 0.89
ATF1-202ENST00000549612 A0A0A0MRY4 1105 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 AXIN1O15169 862 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 HOXC11O43248 304 aaPredicted RBP20.59■□□□□ 0.89
ATF1-202ENST00000549612 GREM1O60565 184 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 TBX18O95935 607 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 CHRM1P11229 460 aaPredicted RBP20.59■□□□□ 0.89
ATF1-202ENST00000549612 SLC6A11P48066 632 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 RAD23BP54727 409 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 GAD2Q05329 585 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 MESP2Q0VG99 397 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 STIM1Q13586 685 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 CCDC186Q7Z3E2 898 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 CACNA2D4Q7Z3S7 1137 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 TATDN2Q93075 761 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 DHTKD1Q96HY7 919 aaPredicted RBP20.59■□□□□ 0.89
ATF1-202ENST00000549612 NMUR1Q9HB89 426 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 MAN1B1Q9UKM7 699 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 USP3Q9Y6I4 520 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 MYH10P35580 1976 aa20.59■□□□□ 0.89
ATF1-202ENST00000549612 A0A1W2PQH9 124 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.58■□□□□ 0.89
ATF1-202ENST00000549612 KAT7O95251 611 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 APODP05090 189 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 IRF1P10914 325 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 SDHBP21912 280 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 ATP5C1P36542 298 aaKnown RBP20.58■□□□□ 0.89
ATF1-202ENST00000549612 PPP1R2P41236 205 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 SEC13P55735 322 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 MRPS21P82921 87 aaKnown RBP20.58■□□□□ 0.89
ATF1-202ENST00000549612 C2orf27AQ580R0 203 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 ARHGAP17Q68EM7 881 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 HTR3DQ70Z44 454 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 ETFBKMTQ8IXQ9 262 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 PHTF2Q8N3S3 785 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 ZNF276Q8N554 614 aa20.58■□□□□ 0.89
ATF1-202ENST00000549612 LOXL4Q96JB6 756 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms