RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ZNF840PA6NDX5 716 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 YJEFN3A6XGL0 299 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 E7ENQ6 273 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 ZNF197O14709 1029 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 FGF19O95750 216 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 GZMAP12544 262 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 GABRB2P47870 512 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 SNX16P57768 344 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 MRPS5P82675 430 aaKnown RBP22.26■■□□□ 1.15
VPS29-206ENST00000549578 TEAD2Q15562 447 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 SLC18A3Q16572 532 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 STXBP5Q5T5C0 1151 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 OR6B2Q6IFH4 312 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 MON1BQ7L1V2 547 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 SCD5Q86SK9 330 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 PHLDB2Q86SQ0 1253 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 TMEM139Q8IV31 216 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 SCML4Q8N228 414 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 PDZD8Q8NEN9 1154 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 OVCA2Q8WZ82 227 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 NECTIN4Q96NY8 510 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 OSER1Q9NX31 292 aa22.26■■□□□ 1.15
VPS29-206ENST00000549578 SOWAHDA6NJG2 315 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 FTLP02792 175 aaPredicted RBP22.25■■□□□ 1.15
VPS29-206ENST00000549578 ZDHHC11BP0C7U3 371 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 CCDC122Q5T0U0 273 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 ALKBH5Q6P6C2 394 aaKnown RBP22.25■■□□□ 1.15
VPS29-206ENST00000549578 OLFML1Q6UWY5 402 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 HFE2Q6ZVN8 426 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 MON1AQ86VX9 555 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 XYLT1Q86Y38 959 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 TMTC1Q8IUR5 882 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 MRPS31Q92665 395 aaKnown RBP22.25■■□□□ 1.15
VPS29-206ENST00000549578 TLR8Q9NR97 1041 aaKnown RBP22.25■■□□□ 1.15
VPS29-206ENST00000549578 NENFQ9UMX5 172 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 DENND4AQ7Z401 1863 aa22.25■■□□□ 1.15
VPS29-206ENST00000549578 NCANO14594 1321 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 RTN2O75298 545 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 YWHAGP61981 247 aaKnown RBP eCLIP22.24■■□□□ 1.15
VPS29-206ENST00000549578 C1QBPQ07021 282 aaKnown RBP22.24■■□□□ 1.15
VPS29-206ENST00000549578 MTF1Q14872 753 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 TAF5Q15542 800 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 TXNDC8Q6A555 127 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 PTCRAQ6ISU1 281 aaPredicted RBP22.24■■□□□ 1.15
VPS29-206ENST00000549578 MCOLN2Q8IZK6 566 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 IRGQQ8WZA9 623 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 TRPC7Q9HCX4 862 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 THEGQ9P2T0 379 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 DENND4CQ5VZ89 1909 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 ANAPC1Q9H1A4 1944 aa22.24■■□□□ 1.15
VPS29-206ENST00000549578 C2orf78A6NCI8 922 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 GOLGA8SH3BPF8 625 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 CALB1P05937 261 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 PPP3CCP48454 512 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 GPR158Q5T848 1215 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 BSPRYQ5W0U4 402 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 POTEHQ6S545 545 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 FAM149B1Q96BN6 582 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 ISCUQ9H1K1 167 aa22.23■■□□□ 1.15
VPS29-206ENST00000549578 ZNF263O14978 683 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 SART1O43290 800 aaKnown RBP22.22■■□□□ 1.15
VPS29-206ENST00000549578 GRAP2O75791 330 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 SP100P23497 879 aaPredicted RBP22.22■■□□□ 1.15
VPS29-206ENST00000549578 SLC6A3Q01959 620 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 ARHGAP15Q53QZ3 475 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 FAM102AQ5T9C2 384 aaPredicted RBP22.22■■□□□ 1.15
VPS29-206ENST00000549578 SNX30Q5VWJ9 437 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 PPP1R2P3Q6NXS1 205 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 RAD9BQ6WBX8 426 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 TOGARAM2Q6ZUX3 1019 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 ZDHHC17Q8IUH5 632 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 NPAS3Q8IXF0 933 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 CCDC170Q8IYT3 715 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 ARHGAP18Q8N392 663 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 EDEM1Q92611 657 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 FGF13Q92913 245 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 SLITRK6Q9H5Y7 841 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 CCSER2Q9H7U1 834 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 STRIP2Q9ULQ0 834 aa22.22■■□□□ 1.15
VPS29-206ENST00000549578 ATMINO43313 823 aaPredicted RBP22.21■■□□□ 1.15
VPS29-206ENST00000549578 LTFP02788 710 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 ABCB4P21439 1286 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 RRM1P23921 792 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 PSEN1P49768 467 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 ZNF268Q14587 947 aaPredicted RBP22.21■■□□□ 1.15
VPS29-206ENST00000549578 LRRC8AQ8IWT6 810 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
VPS29-206ENST00000549578 MAB21L3Q8N8X9 362 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 MCRS1Q96EZ8 462 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 ZSWIM3Q96MP5 696 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 MYADMQ96S97 322 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 NUDT5Q9UKK9 219 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 UNC80Q8N2C7 3258 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 TLR5O60602 858 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 GJB6O95452 261 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
VPS29-206ENST00000549578 RARGP13631 454 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 IL9P15248 144 aa22.21■■□□□ 1.15
VPS29-206ENST00000549578 CYLC1P35663 651 aaPredicted RBP22.21■■□□□ 1.15
VPS29-206ENST00000549578 KCNQ1P51787 676 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms