RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 UPF1Q92900 1129 aaKnown RBP eCLIP14.28□□□□□ -0.126e-10■■■■■ 30.1
HDAC7-228ENST00000548938 PPP2R3CQ969Q6 453 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PXMP2Q9NR77 195 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 HBS1LQ9Y450 684 aaKnown RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 STYXL1Q9Y6J8 313 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 MCF2LO15068 1137 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 UGT1A9O60656 530 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 KRT7P08729 469 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PDE1BQ01064 536 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 GHRHRQ02643 423 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TAZQ16635 292 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 MTERF2Q49AM1 385 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PTPN20Q4JDL3 420 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 NCSTNQ92542 709 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 RILPQ96NA2 401 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 UGT1A7Q9HAW7 530 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 UGT1A10Q9HAW8 530 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 UGT1A8Q9HAW9 530 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 GPAMQ9HCL2 828 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 CYP26B1Q9NR63 512 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 SIRPGQ9P1W8 387 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 APOC2P02655 101 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 ASNSP08243 561 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 KCNJ11Q14654 390 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 ATG16L1Q676U5 607 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 SCARA5Q6ZMJ2 495 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 CCDC60Q8IWA6 550 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-228ENST00000548938 ARHGAP18Q8N392 663 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 DRAXINQ8NBI3 349 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-228ENST00000548938 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 HSPH1Q92598 858 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 IMPG2Q9BZV3 1241 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 CISHQ9NSE2 258 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.12
HDAC7-228ENST00000548938 A0A088AWK7 358 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 RFPL1O75677 317 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
HDAC7-228ENST00000548938 SNRPAP09012 282 aaKnown RBP14.27□□□□□ -0.13
HDAC7-228ENST00000548938 KRT3P12035 628 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 CPOXP36551 454 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
HDAC7-228ENST00000548938 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 DENND1BQ6P3S1 775 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 RNF111Q6ZNA4 994 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 ACAD11Q709F0 780 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 CRLF3Q8IUI8 442 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 NUDCD3Q8IVD9 361 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 KCTD6Q8NC69 237 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 NDNQ99608 321 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 CENPKQ9BS16 269 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 CALN1Q9BXU9 219 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 FBXO40Q9UH90 709 aa14.27□□□□□ -0.13
HDAC7-228ENST00000548938 A0A0B4J269 797 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 LRRIQ4A6NIV6 560 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 KRT37O76014 449 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 ASS1P00966 412 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SLC25A3Q00325 362 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 HADHQ16836 314 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SFT2D3Q587I9 215 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 RDM1Q8NG50 284 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 CCDC28BQ9BUN5 200 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SMYD3Q9H7B4 428 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 PLAC1Q9HBJ0 212 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 S100A14Q9HCY8 104 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SMYD2Q9NRG4 433 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 CYTH4Q9UIA0 394 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SH3BP1Q9Y3L3 701 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 WDR81Q562E7 1941 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 MYL6P60660 151 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 ROR1Q01973 937 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 MMRN1Q13201 1228 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 EMC2Q15006 297 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 FAXCQ5TGI0 409 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 LPCAT4Q643R3 524 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 DHDDSQ86SQ9 333 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 PDSS2Q86YH6 399 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-228ENST00000548938 FAM172AQ8WUF8 416 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms