RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 RAB32Q13637 225 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 KRT78Q8N1N4 520 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 ZNF548Q8NEK5 533 aaPredicted RBP5.35□□□□□ -1.55
CNOT2-215ENST00000548863 DIS3LQ8TF46 1054 aaKnown RBP5.35□□□□□ -1.55
CNOT2-215ENST00000548863 RAPGEF4Q8WZA2 1011 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 FAM234AQ9H0X4 552 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 HIPK2Q9H2X6 1198 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 SMURF2Q9HAU4 748 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.35□□□□□ -1.55
CNOT2-215ENST00000548863 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.35□□□□□ -1.55
CNOT2-215ENST00000548863 CDY1Q9Y6F8 540 aa5.35□□□□□ -1.55
CNOT2-215ENST00000548863 EME2A4GXA9 379 aaPredicted RBP5.34□□□□□ -1.55
CNOT2-215ENST00000548863 CYP19A1P11511 503 aaPredicted RBP5.34□□□□□ -1.55
CNOT2-215ENST00000548863 SLC13A2Q13183 592 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 KCNB1Q14721 858 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 UBAP2Q5T6F2 1119 aaKnown RBP5.34□□□□□ -1.55
CNOT2-215ENST00000548863 KAZALD1Q96I82 304 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 CAMK1GQ96NX5 476 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 DNMT3BQ9UBC3 853 aaKnown RBP5.34□□□□□ -1.55
CNOT2-215ENST00000548863 GABBR1Q9UBS5 961 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 STAP2Q9UGK3 403 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 ZNF112Q9UJU3 913 aa5.34□□□□□ -1.55
CNOT2-215ENST00000548863 NCLP19338 710 aaKnown RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 EN2P19622 333 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 IGBP1P78318 339 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 MTX1Q13505 466 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 INSCQ1MX18 579 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 SLC9C1Q4G0N8 1177 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 DCAF12L1Q5VU92 463 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 COLCA1Q6ZS62 124 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 DAAM2Q86T65 1068 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 DENND1CQ8IV53 801 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 MMP21Q8N119 569 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 PELI3Q8N2H9 469 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 RBMXL3Q8N7X1 1067 aaKnown RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 DNAJB14Q8TBM8 379 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 WIPF2Q8TF74 440 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 EDC3Q96F86 508 aaKnown RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 WDYHV1Q96HA8 205 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 HS6ST2Q96MM7 605 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 ZNF518BQ9C0D4 1074 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 ZBTB40Q9NUA8 1239 aa5.33□□□□□ -1.56
CNOT2-215ENST00000548863 RGS17Q9UGC6 210 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-215ENST00000548863 A0A1W2PPL8 197 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 CLIC1O00299 241 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
CNOT2-215ENST00000548863 CCP110O43303 1012 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 TBC1D4O60343 1298 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 PF4V1P10720 104 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 HTR1BP28222 390 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 ZNF750Q32MQ0 723 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 ADHFE1Q8IWW8 467 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 C12orf76Q8N812 135 aaPredicted RBP5.32□□□□□ -1.56
CNOT2-215ENST00000548863 HIC2Q96JB3 615 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 CTAGE1Q96RT6 745 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 PPP1R9BQ96SB3 815 aa5.32□□□□□ -1.56
CNOT2-215ENST00000548863 A8MVJ9 347 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 GTPBP1O00178 669 aaKnown RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 UBXN7O94888 489 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 FGF2P09038 288 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 MTHFSP49914 203 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 NEK2P51955 445 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 AGFG1P52594 562 aaKnown RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 B4GALNT1Q00973 533 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 IFIT1BQ5T764 474 aaKnown RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 B3GNT9Q6UX72 402 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 C16orf71Q8IYS4 520 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 MPP5Q8N3R9 675 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 NGDNQ8NEJ9 315 aaKnown RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 BCAS4Q8TDM0 211 aa5.31□□□□□ -1.56
CNOT2-215ENST00000548863 THOC3Q96J01 351 aaKnown RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 PNMA8BQ9ULN7 279 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-215ENST00000548863 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 TMEM233B4DJY2 109 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 PRSS44E7EML9 344 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 PHGDHO43175 533 aaKnown RBP5.3□□□□□ -1.56
CNOT2-215ENST00000548863 SRGAP2O75044 1071 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 TNFRSF1BP20333 461 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 TACR3P29371 465 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 STIM1Q13586 685 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 MFSD13AQ14CX5 517 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 PNPLA1Q8N8W4 532 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 STAG1Q8WVM7 1258 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 SPSB4Q96A44 273 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 NT5C1BQ96P26 610 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 VPS33BQ9H267 617 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 ZMAT3Q9HA38 289 aaKnown RBP5.3□□□□□ -1.56
CNOT2-215ENST00000548863 MLXIPQ9HAP2 919 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 SEMA4BQ9NPR2 832 aaPredicted RBP5.3□□□□□ -1.56
CNOT2-215ENST00000548863 TYW1Q9NV66 732 aaKnown RBP5.3□□□□□ -1.56
CNOT2-215ENST00000548863 DDX56Q9NY93 547 aaKnown RBP5.3□□□□□ -1.56
CNOT2-215ENST00000548863 SEMA5BQ9P283 1151 aa5.3□□□□□ -1.56
CNOT2-215ENST00000548863 IP6K2Q9UHH9 426 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms