RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 THADAQ6YHU6 1953 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 DCLK1O15075 740 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 KAT7O95251 611 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 ZNF806P0C7X5 589 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 MPLP40238 635 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 SLC6A11P48066 632 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 GCLMP48507 274 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 KDSRQ06136 332 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 LY6G5CQ5SRR4 150 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 INTS8Q75QN2 995 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 GPRIN1Q7Z2K8 1008 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 PHTF2Q8N3S3 785 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 TAS1R2Q8TE23 839 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 WBP2Q969T9 261 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 OTUB2Q96DC9 234 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 TPSD1Q9BZJ3 242 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.41■□□□□ 0.542e-11■■■■■ 173.1
CHMP1A-205ENST00000548650 RXFP3Q9NSD7 469 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 MAPK8IP1Q9UQF2 711 aa18.41■□□□□ 0.54
CHMP1A-205ENST00000548650 FAM200BP0CF97 657 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 HNRNPLP14866 589 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 ADORA2BP29275 332 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 DGKEP52429 567 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 LIMK1P53667 647 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 MAP3K7CLP57077 242 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 ENPEPQ07075 957 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 AASDHQ4L235 1098 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 ANO7Q6IWH7 933 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 CLEC20AQ6ZU45 233 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 BBS7Q8IWZ6 715 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 ETFBKMTQ8IXQ9 262 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 FAM186BQ8IYM0 893 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 CCDC33Q8N5R6 958 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 MDGA1Q8NFP4 955 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 CCDC47Q96A33 483 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 CNOT6LQ96LI5 555 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 PNKPQ96T60 521 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 IMPG2Q9BZV3 1241 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 NIF3L1Q9GZT8 377 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 SMOC1Q9H4F8 434 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 SH3BP1Q9Y3L3 701 aa18.4■□□□□ 0.54
CHMP1A-205ENST00000548650 EPG5Q9HCE0 2579 aa18.39■□□□□ 0.54
CHMP1A-205ENST00000548650 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 HHLA1C9JL84 531 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 HOXC11O43248 304 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 TLR5O60602 858 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 KIR2DL1P43626 348 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 MRPS21P82921 87 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 ELF2Q15723 593 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 CRY1Q16526 586 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 PPM1JQ5JR12 505 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 ALLCQ8N6M5 410 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 C12orf50Q8NA57 414 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 IL17RCQ8NAC3 791 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 WHAMMQ8TF30 809 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 HNRNPABQ99729 332 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 FBXO44Q9H4M3 255 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 ARHGEF4Q9NR80 690 aa18.39■□□□□ 0.53
CHMP1A-205ENST00000548650 A0A0A0MRY4 1105 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 CYP26A1O43174 497 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 GREM1O60565 184 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 CILPO75339 1184 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 APODP05090 189 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 ADRB1P08588 477 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 IRF1P10914 325 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 MCCD1P59942 119 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 GAD2Q05329 585 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 PMS2CLQ68D20 193 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TCEAL6Q6IPX3 200 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TXNDC5Q8NBS9 432 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TCEAL3Q969E4 200 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 NACA2Q9H009 215 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 MMRN2Q9H8L6 949 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 CYP3A43Q9HB55 503 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TMEM8AQ9HCN3 771 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 PNPLA8Q9NP80 782 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 TLR8Q9NR97 1041 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 VPS45Q9NRW7 570 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 OSER1Q9NX31 292 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
CHMP1A-205ENST00000548650 SGK1O00141 431 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 RHOBTB1O94844 696 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 ZNF202O95125 648 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 KRT13P13646 458 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 CD58P19256 250 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 BCKDHBP21953 392 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 RPL13P26373 211 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 PSMC2P35998 433 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 GRIA2P42262 883 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 EDRF1Q3B7T1 1238 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 HSF5Q4G112 596 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 SMYD4Q8IYR2 804 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 NMUR1Q9HB89 426 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms