RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 LONP2Q86WA8 852 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 GPC2Q8N158 579 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 PCDH19Q8TAB3 1148 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 KCNV2Q8TDN2 545 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.275e-7■■■□□ 15.6
CNOT2-209ENST00000548159 TTC17Q96AE7 1141 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 VPS11Q9H270 941 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 VRTNQ9H8Y1 702 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 FAM49BQ9NUQ9 324 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 DPP3Q9NY33 737 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 PPEF2O14830 753 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 UGT1A9O60656 530 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 INHBAP08476 426 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 BGNP21810 368 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 KRT81Q14533 505 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 TRIP11Q15643 1979 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 SLC45A4Q5BKX6 768 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 LCLAT1Q6UWP7 414 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 ASB7Q9H672 318 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 UGT1A7Q9HAW7 530 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 UGT1A10Q9HAW8 530 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 UGT1A8Q9HAW9 530 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 CYP3A43Q9HB55 503 aa16.74■□□□□ 0.27
CNOT2-209ENST00000548159 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
CNOT2-209ENST00000548159 HCRTO43612 131 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ZNF286BP0CG31 522 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 CDC25CP30307 473 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ATICP31939 592 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 SLC26A2P50443 739 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ATXN1P54253 815 aaKnown RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 YWHAZP63104 245 aaKnown RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 PARP6Q2NL67 630 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 GOLGA7BQ2TAP0 167 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 PPP6R3Q5H9R7 873 aaPredicted RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ACOT1Q86TX2 421 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 CAND1Q86VP6 1230 aaKnown RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 TTC30AQ86WT1 665 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 CTAGE3PQ8IX95 158 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 PPM1NQ8N819 430 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 CCDC110Q8TBZ0 833 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 FAM172AQ8WUF8 416 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ZNF570Q96NI8 536 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 RAB3IPQ96QF0 476 aaPredicted RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 FBXO6Q9NRD1 293 aaPredicted RBP16.73■□□□□ 0.27
CNOT2-209ENST00000548159 NR2E3Q9Y5X4 410 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 IKBKGQ9Y6K9 419 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 SCN1AP35498 2009 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 ATP5HO75947 161 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 SLC25A27O95847 323 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 LGALS2P05162 132 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 APRTP07741 180 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 DHRS4L1P0CG22 281 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 NEK3P51956 506 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 INCA1Q0VD86 236 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 FYB2Q5VWT5 728 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 TSSK1BQ9BXA7 367 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 NT5C1AQ9BXI3 368 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 NFKBIZQ9BYH8 718 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 KCNK13Q9HB14 408 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 SMYD2Q9NRG4 433 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 HEY2Q9UBP5 337 aa16.73■□□□□ 0.27
CNOT2-209ENST00000548159 IQANK1A0A1B0GTG1 560 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 BCAR1P56945 870 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 ARHGAP1Q07960 439 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TFDP2Q14188 446 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 ALKBH8Q96BT7 664 aaKnown RBP16.72■□□□□ 0.27
CNOT2-209ENST00000548159 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
CNOT2-209ENST00000548159 MIPEPQ99797 713 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 SNRNP25Q9BV90 132 aaKnown RBP16.72■□□□□ 0.27
CNOT2-209ENST00000548159 MIS12Q9H081 205 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.72■□□□□ 0.27
CNOT2-209ENST00000548159 CFAP69A5D8W1 941 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TRIM49D1C9J1S8 452 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 TROVE2P10155 538 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNOT2-209ENST00000548159 P4HA1P13674 534 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 SLC18A2Q05940 514 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 FAM187BQ17R55 369 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 OLFML1Q6UWY5 402 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 INPP5DQ92835 1189 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 APOPT1Q96IL0 206 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 MECRQ9BV79 373 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
CNOT2-209ENST00000548159 SMAPO00193 183 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 CHADO15335 359 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 PEX11AO75192 247 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 ENTPD5O75356 428 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 NEFHP12036 1026 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 CLNS1AP54105 237 aaKnown RBP16.71■□□□□ 0.27
CNOT2-209ENST00000548159 TNFAIP2Q03169 654 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 BMPR2Q13873 1038 aa16.71■□□□□ 0.27
CNOT2-209ENST00000548159 FAM47CQ5HY64 1035 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms