RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ARPP19P56211 112 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 YWHAHQ04917 246 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 POTEHQ6S545 545 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 RNF19BQ6ZMZ0 732 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 GRASPQ7Z6J2 395 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 MAIP1Q8WWC4 291 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 TATDN2Q93075 761 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 TMEM209Q96SK2 561 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 ZSWIM1Q9BR11 485 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 IMPG2Q9BZV3 1241 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 CRISPLD1Q9H336 500 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 VPS18Q9P253 973 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 UTP11Q9Y3A2 253 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 ZDBF2Q9HCK1 2354 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 NRG2O14511 850 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 FGGP02679 453 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 UNGP13051 313 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 CHRNA3P32297 505 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 BIRC3Q13489 604 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 MTMR3Q13615 1198 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 CUL2Q13617 745 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 LRIG3Q6UXM1 1119 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 DSTYKQ6XUX3 929 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 OTOP3Q7RTS5 596 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 KLHL7Q8IXQ5 586 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 OR10T2Q8NGX3 314 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF564Q8TBZ8 553 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 MTMR12Q9C0I1 747 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 RASAL2Q9UJF2 1139 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF318Q5VUA4 2279 aa18.16■□□□□ 0.5
RBFOX1-207ENST00000547338 RNF40O75150 1001 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 ITGB3P05106 788 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 KRT5P13647 590 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 POLR2BP30876 1174 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 CTNNA1P35221 906 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 GGCXP38435 758 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 CARSP49589 748 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 TAF6P49848 677 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 PEX5P50542 639 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 TPGS2Q68CL5 300 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 OVOS1Q6IE37 1185 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 RTL10Q7L3V2 364 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 IQCKQ8N0W5 287 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 CD101Q93033 1021 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF653Q96CK0 615 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 NUP85Q9BW27 656 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 PIDD1Q9HB75 910 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 EPS15L1Q9UBC2 864 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 DNMT3BQ9UBC3 853 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 NFU1Q9UMS0 254 aa18.15■□□□□ 0.5
RBFOX1-207ENST00000547338 AGPSO00116 658 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 CYP1A1P04798 512 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 ODC1P11926 461 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 YWHAEP62258 255 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 CENPCQ03188 943 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 SGSM1Q2NKQ1 1148 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 CFAP58Q5T655 872 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 WSCD1Q658N2 575 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 TRIM67Q6ZTA4 783 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 IFT81Q8WYA0 676 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 ASIC4Q96FT7 647 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 MRPL47Q9HD33 250 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 AFF4Q9UHB7 1163 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 INSL5Q9Y5Q6 135 aa18.14■□□□□ 0.49
RBFOX1-207ENST00000547338 PRR33A8MZF0 331 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 KPNA7A9QM74 516 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 CYB561D2O14569 222 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 PHACTR2O75167 634 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ACO1P21399 889 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 PAX3P23760 479 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 RWDD2BP57060 319 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 RNASE9P60153 205 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ADCY1Q08828 1119 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 PTP4A2Q12974 167 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 DUOXA2Q1HG44 320 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 SLC5A9Q2M3M2 681 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 TAF3Q5VWG9 929 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 HFE2Q6ZVN8 426 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 GET4Q7L5D6 327 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 MCOLN2Q8IZK6 566 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 TTC9BQ8N6N2 239 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ITFG1Q8TB96 612 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 RSAD2Q8WXG1 361 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 FAM124BQ9H5Z6 455 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 CYP4F11Q9HBI6 524 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 CNOT8Q9UFF9 292 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 AGAP1Q9UPQ3 857 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 SORCS3Q9UPU3 1222 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms