RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZFRQ96KR1 1074 aaKnown RBP16.75■□□□□ 0.27
DDX54-204ENST00000546898 NACA2Q9H009 215 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 SMPD4Q9NXE4 827 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 MYOFQ9NZM1 2061 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 OTOL1A6NHN0 477 aaPredicted RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 PROB1E7EW31 1015 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 O00370 1275 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 GJA4P35212 333 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 MRE11P49959 708 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 CCINQ13939 588 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 MAN2A1Q16706 1144 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 ZNF528Q3MIS6 628 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 SMYD5Q6GMV2 418 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 RRAGAQ7L523 313 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 ENOSF1Q7L5Y1 443 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 TADA2BQ86TJ2 420 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 OTUB2Q96DC9 234 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 CDK5RAP1Q96SZ6 601 aaKnown RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 PRMT8Q9NR22 394 aaPredicted RBP16.74■□□□□ 0.27
DDX54-204ENST00000546898 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 CFAP97Q9P2B7 532 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 TBC1D14Q9P2M4 693 aa16.74■□□□□ 0.27
DDX54-204ENST00000546898 RARGP13631 454 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 ATP5C1P36542 298 aaKnown RBP16.73■□□□□ 0.27
DDX54-204ENST00000546898 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 ZNF132P52740 706 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 PDE4CQ08493 712 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 MTAPQ13126 283 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 PPP2R5DQ14738 602 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 TMEM196Q5HYL7 178 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 TRIM65Q6PJ69 517 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 ZC3H14Q6PJT7 736 aaKnown RBP16.73■□□□□ 0.27
DDX54-204ENST00000546898 LCLAT1Q6UWP7 414 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 MAML2Q8IZL2 1156 aaPredicted RBP16.73■□□□□ 0.27
DDX54-204ENST00000546898 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 CHFRQ96EP1 664 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 KREMEN1Q96MU8 473 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 NMUR1Q9HB89 426 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX54-204ENST00000546898 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 CNTN6Q9UQ52 1028 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
DDX54-204ENST00000546898 A0A1W2PQH9 124 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 SP9P0CG40 484 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 RALAP11233 206 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 PGFP49763 221 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 CCR3P51677 355 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 TKTL1P51854 596 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX54-204ENST00000546898 CNGA2Q16280 664 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 PKDCCQ504Y2 493 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 SPEM1Q8N4L4 309 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 PHOX2BQ99453 314 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 P2RY13Q9BPV8 354 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 LINC00597Q9H2U6 94 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 APEX2Q9UBZ4 518 aa16.72■□□□□ 0.27
DDX54-204ENST00000546898 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX54-204ENST00000546898 RNF225M0QZC1 329 aaPredicted RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 CYP17A1P05093 508 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 DRD1P21728 446 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 EEF1GP26641 437 aaKnown RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 MFAP3P55082 362 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 MEA1Q16626 185 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 PM20D1Q6GTS8 502 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 SCD5Q86SK9 330 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 KCTD13Q8WZ19 329 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 CD101Q93033 1021 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 KLF16Q9BXK1 252 aaPredicted RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 FAM126AQ9BYI3 521 aaPredicted RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 UBE2TQ9NPD8 197 aaPredicted RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 RBM12Q9NTZ6 932 aaKnown RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 DNMT3LQ9UJW3 386 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
DDX54-204ENST00000546898 ATG2BQ96BY7 2078 aa16.71■□□□□ 0.27
DDX54-204ENST00000546898 TULP2O00295 520 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
DDX54-204ENST00000546898 ZBED1O96006 694 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 ADH1CP00326 375 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 SLC9A1P19634 815 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
DDX54-204ENST00000546898 EIF2DP41214 584 aaKnown RBP16.7■□□□□ 0.26
DDX54-204ENST00000546898 CSTF1Q05048 431 aaKnown RBP16.7■□□□□ 0.26
DDX54-204ENST00000546898 GAS6Q14393 721 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 FBXO43Q4G163 708 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 C10orf120Q5SQS8 335 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms