RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 LSM8O95777 96 aaKnown RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 CFHP08603 1231 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 PGFP49763 221 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 MLLT6P55198 1093 aaPredicted RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 PFKPQ01813 784 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 CDR2Q01850 454 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 SIGLEC14Q08ET2 396 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 ADIGQ0VDE8 80 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 BEND5Q7L4P6 421 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 NOP9Q86U38 636 aaKnown RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 SIX6OS1Q8N1H7 587 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 BAP1Q92560 729 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 IRF7Q92985 503 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 RSPRY1Q96DX4 576 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 LRRC3BQ96PB8 259 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 NOX5Q96PH1 765 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 ULBP1Q9BZM6 244 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 NMUR1Q9HB89 426 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 THG1LQ9NWX6 298 aaKnown RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 OSER1Q9NX31 292 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 CYTH4Q9UIA0 394 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 NOCTQ9UK39 431 aaKnown RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 PATJQ8NI35 1801 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 A0A1W2PQH9 124 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 TLR5O60602 858 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 ABL1P00519 1130 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 CKMP06732 381 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 RALAP11233 206 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 RARGP13631 454 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 FERP16591 822 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 ATP5C1P36542 298 aaKnown RBP15.2■□□□□ 0.02
DDX54-203ENST00000546869 DAOAP59103 153 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 GPC5P78333 572 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 PDCLQ13371 301 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 ARHGAP29Q52LW3 1261 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 SARM1Q6SZW1 724 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 TRIM67Q6ZTA4 783 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 IRF2BP2Q7Z5L9 587 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX54-203ENST00000546869 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 RNF214Q8ND24 703 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 DNASE1L2Q92874 299 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 XPO4Q9C0E2 1151 aaKnown RBP15.2■□□□□ 0.02
DDX54-203ENST00000546869 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
DDX54-203ENST00000546869 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 ABCC13Q9NSE7 274 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 AIPL1Q9NZN9 384 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 NAGPAQ9UK23 515 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 CCL26Q9Y258 94 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 CEP83Q9Y592 693 aa15.2■□□□□ 0.02
DDX54-203ENST00000546869 DENND4CQ5VZ89 1909 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 ARNTLO00327 626 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 ZNF263O14978 683 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 CYP1A1P04798 512 aaPredicted RBP15.19■□□□□ 0.02
DDX54-203ENST00000546869 LCP1P13796 627 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 RGS7P49802 495 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
DDX54-203ENST00000546869 ZXDBP98169 803 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 USP4Q13107 963 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 ZNF77Q15935 545 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 SYN2Q92777 582 aaPredicted RBP15.19■□□□□ 0.02
DDX54-203ENST00000546869 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 ZFRQ96KR1 1074 aaKnown RBP15.19■□□□□ 0.02
DDX54-203ENST00000546869 FAM83CQ9BQN1 747 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
DDX54-203ENST00000546869 ST7Q9NRC1 585 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
DDX54-203ENST00000546869 DNMT3LQ9UJW3 386 aa15.19■□□□□ 0.02
DDX54-203ENST00000546869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
DDX54-203ENST00000546869 OBSL1O75147 1896 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 ZNF638Q14966 1978 aaKnown RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 YJEFN3A6XGL0 299 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 E7ENQ6 273 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 LEFTY2O00292 366 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 NARSO43776 548 aaKnown RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 GLI1P08151 1106 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 MBL2P11226 248 aaPredicted RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 GLULP15104 373 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 CHRNB2P17787 502 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 GABRB2P47870 512 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 BSPRYQ5W0U4 402 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 BTBD8Q5XKL5 378 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 BMP8AQ7Z5Y6 402 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 ZDHHC17Q8IUH5 632 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 SCUBE3Q8IX30 993 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 YAF2Q8IY57 180 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 ST13P5Q8NFI4 369 aaPredicted RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 SH3RF2Q8TEC5 729 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 ASIC4Q96FT7 647 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 CPXM1Q96SM3 734 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 TRIM62Q9BVG3 475 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 MIS12Q9H081 205 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms