RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 TRIM66O15016 1216 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 TRAK2O60296 914 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 ITGB3P05106 788 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 BDNFP23560 247 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 TFAMQ00059 246 aaKnown RBP12.8□□□□□ -0.36
BRF1-207ENST00000546417 PTPRNQ16849 979 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 METTL3Q86U44 580 aaKnown RBP12.8□□□□□ -0.36
BRF1-207ENST00000546417 OSTM1Q86WC4 334 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
BRF1-207ENST00000546417 BAP1Q92560 729 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 TOE1Q96GM8 510 aaKnown RBP12.8□□□□□ -0.36
BRF1-207ENST00000546417 CDK5RAP3Q96JB5 506 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 ACOX2Q99424 681 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.8□□□□□ -0.36
BRF1-207ENST00000546417 SH3BP1Q9Y3L3 701 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 HECTD1Q9ULT8 2610 aa12.8□□□□□ -0.36
BRF1-207ENST00000546417 KNL1Q8NG31 2342 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 GFRA2O00451 464 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 ATP2C2O75185 946 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 FAM13AO94988 1023 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 GRK6P43250 576 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 GTF2BQ00403 316 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 BNC1Q01954 994 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 TAF10Q12962 218 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 IL17AQ16552 155 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 TDRD10Q5VZ19 366 aaKnown RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 GRAMD4Q6IC98 578 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 DHRS13Q6UX07 377 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 CRELD2Q6UXH1 353 aaPredicted RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 DPH6Q7L8W6 267 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 TMEM25Q86YD3 366 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 CSGALNACT2Q8N6G5 542 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 C1orf127Q8N9H9 656 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 XPO6Q96QU8 1125 aaKnown RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 PLIN2Q99541 437 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 SYT15Q9BQS2 421 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 REEP2Q9BRK0 252 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 SLC6A17Q9H1V8 727 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 CLMPQ9H6B4 373 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 ITM2CQ9NQX7 267 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 USP36Q9P275 1121 aaKnown RBP12.79□□□□□ -0.36
BRF1-207ENST00000546417 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
BRF1-207ENST00000546417 SPTA1P02549 2419 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 METTL12A8MUP2 240 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
BRF1-207ENST00000546417 TRIM24O15164 1050 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 HCRTO43612 131 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 OXTRP30559 389 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 HNF1BP35680 557 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 ZNF131P52739 623 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 SEMG2Q02383 582 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 POSTNQ15063 836 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 SOWAHAQ2M3V2 549 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 ITGA11Q9UKX5 1188 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
BRF1-207ENST00000546417 TMEM131Q92545 1883 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 A0A1B0GVT2 93 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 TISP43B9A030 160 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 F8VP50 259 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 TLX3O43711 291 aaPredicted RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 KRT19P08727 400 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 JUPP14923 745 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 PLCG1P19174 1290 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 ZNF132P52740 706 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 PSMC1P62191 440 aaKnown RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 RBP5P82980 135 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 STARD3Q14849 445 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 INAVAQ3KP66 663 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 C8orf48Q96LL4 319 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
BRF1-207ENST00000546417 EIF2B4Q9UI10 523 aaKnown RBP12.77□□□□□ -0.37
BRF1-207ENST00000546417 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms