RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.19
SCAP-215ENST00000545718 TTC30AQ86WT1 665 aa16.27■□□□□ 0.19
SCAP-215ENST00000545718 LRRC6Q86X45 466 aa16.27■□□□□ 0.19
SCAP-215ENST00000545718 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.19
SCAP-215ENST00000545718 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.19
SCAP-215ENST00000545718 SNRNP25Q9BV90 132 aaKnown RBP16.27■□□□□ 0.19
SCAP-215ENST00000545718 ITGA11Q9UKX5 1188 aa16.27■□□□□ 0.19
SCAP-215ENST00000545718 SYNJ2BP-COX16A0A087WUM0 186 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 TROVE2P10155 538 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCAP-215ENST00000545718 LCP1P13796 627 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 MOGSQ13724 837 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 TAF1BQ53T94 588 aaPredicted RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 MTHFD1LQ6UB35 978 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 MTDHQ86UE4 582 aaKnown RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 SERAC1Q96JX3 654 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ARHGEF3Q9NR81 526 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 COX16Q9P0S2 106 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 DCTN3O75935 186 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ACAP1Q15027 740 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 CYP4V2Q6ZWL3 525 aaPredicted RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 FASTKD5Q7L8L6 764 aaKnown RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 NLRP9Q7RTR0 991 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 PTPRN2Q92932 1015 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 TRIM6Q9C030 488 aaPredicted RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 MANSC1Q9H8J5 431 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 PPCSQ9HAB8 311 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 SETD4Q9NVD3 440 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ZC3H7BQ9UGR2 993 aaKnown RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
SCAP-215ENST00000545718 E7ESA3 106 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 PFKMP08237 780 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ZBTB16Q05516 673 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 CATSPER4Q7RTX7 472 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 RFWD2Q8NHY2 731 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 PCDH19Q8TAB3 1148 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 SLC13A1Q9BZW2 595 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 DPEP3Q9H4B8 488 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 PCDH18Q9HCL0 1135 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 ZFP69BQ9UJL9 534 aa16.26■□□□□ 0.19
SCAP-215ENST00000545718 A8MXQ7 604 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 DESP17661 470 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 BMPR2Q13873 1038 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 N4BP2L2Q92802 583 aaPredicted RBP16.25■□□□□ 0.19
SCAP-215ENST00000545718 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
SCAP-215ENST00000545718 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 PAPPA2Q9BXP8 1791 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 TRIM49D1C9J1S8 452 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 ANP32DO95626 131 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 ANK1P16157 1881 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 BGNP21810 368 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 AKAP5P24588 427 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 PPIL2Q13356 520 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 GRIK4Q16099 956 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 TAPT1Q6NXT6 567 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 BANPQ8N9N5 519 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 C10orf82Q8WW14 230 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 KLC2Q9H0B6 622 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 GBA2Q9HCG7 927 aaPredicted RBP16.25■□□□□ 0.19
SCAP-215ENST00000545718 PAK5Q9P286 719 aa16.25■□□□□ 0.19
SCAP-215ENST00000545718 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 PAPSS1O43252 624 aaPredicted RBP16.24■□□□□ 0.19
SCAP-215ENST00000545718 CCDC130P13994 396 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 GBE1Q04446 702 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 INCA1Q0VD86 236 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 FAM187BQ17R55 369 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 PLEKHG4Q58EX7 1191 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 ASRGL1Q7L266 308 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 KIRREL3Q8IZU9 778 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 TSSK1BQ9BXA7 367 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 EIF2AQ9BY44 585 aaKnown RBP16.24■□□□□ 0.19
SCAP-215ENST00000545718 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 PIH1D1Q9NWS0 290 aaKnown RBP16.24■□□□□ 0.19
SCAP-215ENST00000545718 C2CD2Q9Y426 696 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 TEX264Q9Y6I9 313 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 A6NJR5 290 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 IL4RP24394 825 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 KCNJ11Q14654 390 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 OLFML1Q6UWY5 402 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 DPP9Q86TI2 863 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 AGGF1Q8N302 714 aaeCLIP16.24■□□□□ 0.19
SCAP-215ENST00000545718 PQLC3Q8N755 202 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 OSMRQ99650 979 aa16.24■□□□□ 0.19
SCAP-215ENST00000545718 CCDC195A0A1B0GUA6 201 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 A0A1B0GUA9 196 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 CFAP69A5D8W1 941 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 CXorf49A8MYA2 514 aaPredicted RBP16.23■□□□□ 0.19
SCAP-215ENST00000545718 UGT1A9O60656 530 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 CYP2F1P24903 491 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 SLC18A1P54219 525 aa16.23■□□□□ 0.19
SCAP-215ENST00000545718 YWHAZP63104 245 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms