RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 RAB3IPQ96QF0 476 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 GLT8D2Q9H1C3 349 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 RETREG1Q9H6L5 497 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PICK1Q9NRD5 415 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PAPOLBQ9NRJ5 636 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SETD4Q9NVD3 440 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SLC12A6Q9UHW9 1150 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MYO7AQ13402 2215 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 E2F8A0AVK6 867 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CLDN3O15551 220 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TREHO43280 583 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 ZBED4O75132 1171 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TMEM253P0C7T8 217 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MYBL1P10243 752 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CCT5P48643 541 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 ERFP50548 548 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CLCN2P51788 898 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 IFRD2Q12894 506 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PPIL2Q13356 520 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CA9Q16790 459 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 GPR142Q7Z601 462 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 RHPN2Q8IUC4 686 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 KIAA1143Q96AT1 154 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 GINS4Q9BRT9 223 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SPON1Q9HCB6 807 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TMEM8AQ9HCN3 771 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 STMN3Q9NZ72 180 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 EFR3BQ9Y2G0 817 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CHD5Q8TDI0 1954 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SNTNA6NMZ2 147 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PI4K2BG5E9Z4 385 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TSPAN1O60635 241 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 DGAT1O75907 488 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 KRT38O76015 456 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CLUP10909 449 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 ARPC4P59998 168 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 IFI35P80217 286 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 OLIG2Q13516 323 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MBTPS1Q14703 1052 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 STXBP2Q15833 593 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 BRDTQ58F21 947 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 HP1BP3Q5SSJ5 553 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PPP1R14AQ96A00 147 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 RNPC3Q96LT9 517 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 NXF3Q9H4D5 531 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 INTUQ9ULD6 942 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 LACTBL1A8MY62 500 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TRIM66O15016 1216 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 STAM2O75886 525 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MTA2O94776 668 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 HEXIM1O94992 359 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MAP3K6O95382 1288 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 GH1P01241 217 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MXI1P50539 228 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 PGGT1BP53609 377 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 HADHBP55084 474 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 RTP1P59025 263 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CDR2Q01850 454 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CENPCQ03188 943 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SCARA5Q6ZMJ2 495 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TSHZ1Q6ZSZ6 1077 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 C1orf54Q8WWF1 131 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 ZNF606Q8WXB4 792 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SEPT1Q8WYJ6 367 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 SMG7Q92540 1137 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MRPS26Q9BYN8 205 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 KLHL25Q9H0H3 589 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 EHMT1Q9H9B1 1298 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 DNAJC17Q9NVM6 304 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 HOXC10Q9NYD6 342 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 MAP3K20Q9NYL2 800 aaKnown RBP4.96□□□□□ -1.62
SMAD5-212ENST00000545620 TBK1Q9UHD2 729 aa4.96□□□□□ -1.62
SMAD5-212ENST00000545620 CCDC162PA2VCL2 907 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 SYNDIG1LA6NDD5 238 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 ENSAO43768 121 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 FYNP06241 537 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 SEC24CP53992 1094 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 SLC25A11Q02978 314 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 KIZQ2M2Z5 673 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 RUNDC3AQ59EK9 446 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 GLRA4Q5JXX5 417 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 LSM14AQ8ND56 463 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 TRIM58Q8NG06 486 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 MDM1Q8TC05 714 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 S100PBPQ96BU1 408 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 ACCSQ96QU6 501 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 PPANQ9NQ55 473 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 AGO2Q9UKV8 859 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 SVEP1Q4LDE5 3571 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 ASAP2O43150 1006 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 KRT86O43790 486 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 EPB41P11171 864 aaKnown RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 ESRRAP11474 423 aaPredicted RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 CCND1P24385 295 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 CTCFP49711 727 aaPredicted RBP4.95□□□□□ -1.62
SMAD5-212ENST00000545620 TUBA1BP68363 451 aa4.95□□□□□ -1.62
SMAD5-212ENST00000545620 KRT17Q04695 432 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms