RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TCF3P15923 654 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 ENGP17813 658 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 SCAPQ12770 1279 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 MTF1Q14872 753 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 SGSM1Q2NKQ1 1148 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 ARMCX6Q7L4S7 300 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
DDX55-212ENST00000544738 B3GALNT2Q8NCR0 500 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 TAF4BQ92750 862 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 EZH1Q92800 747 aaPredicted RBP17.22■□□□□ 0.35
DDX55-212ENST00000544738 CD101Q93033 1021 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 TNIP3Q96KP6 325 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 TTLL2Q9BWV7 592 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 EVLQ9UI08 416 aaPredicted RBP17.22■□□□□ 0.35
DDX55-212ENST00000544738 OBSL1O75147 1896 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 CELSR3Q9NYQ7 3312 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 MAPK13O15264 365 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 CAPNS1P04632 268 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 DPYDQ12882 1025 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 NFIL3Q16649 462 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 ZACNQ401N2 412 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 CEP135Q66GS9 1140 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 PIP4P1Q86T03 277 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 CPA6Q8N4T0 437 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 OSCP1Q8WVF1 389 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 HNRNPLLQ8WVV9 542 aaKnown RBP17.21■□□□□ 0.35
DDX55-212ENST00000544738 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 DPEP3Q9H4B8 488 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 DUS2Q9NX74 493 aaKnown RBP17.21■□□□□ 0.35
DDX55-212ENST00000544738 ARHGAP26Q9UNA1 814 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 NME7Q9Y5B8 376 aa17.21■□□□□ 0.35
DDX55-212ENST00000544738 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 FAM221BA6H8Z2 402 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 ZNF202O95125 648 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 VNN1O95497 513 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 RPL13P26373 211 aaKnown RBP17.2■□□□□ 0.34
DDX55-212ENST00000544738 IFNAR2P48551 515 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 ATXN3P54252 364 aaPredicted RBP17.2■□□□□ 0.34
DDX55-212ENST00000544738 SEC13P55735 322 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 FAM193AP78312 1265 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 DLG4P78352 724 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 USP4Q13107 963 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 NR1H3Q13133 447 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 SEMA3BQ13214 749 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 ZNF77Q15935 545 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 C2orf27AQ580R0 203 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 TMEFF1Q8IYR6 380 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 KIAA1958Q8N8K9 716 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 SH3RF2Q8TEC5 729 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 RLN3Q8WXF3 142 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 BBC3Q96PG8 261 aaPredicted RBP17.2■□□□□ 0.34
DDX55-212ENST00000544738 SLITRK1Q96PX8 696 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 GTPBP2Q9BX10 602 aaKnown RBP17.2■□□□□ 0.34
DDX55-212ENST00000544738 B3GNT5Q9BYG0 378 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 TMEM74BQ9NUR3 256 aa17.2■□□□□ 0.34
DDX55-212ENST00000544738 MBD1Q9UIS9 605 aaPredicted RBP17.2■□□□□ 0.34
DDX55-212ENST00000544738 ZNF840PA6NDX5 716 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 RTN3O95197 1032 aaPredicted RBP17.19■□□□□ 0.34
DDX55-212ENST00000544738 CFIP05156 583 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
DDX55-212ENST00000544738 NR2F2P24468 414 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 CDH8P55286 799 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 USP46P62068 366 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 ENPEPQ07075 957 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 BECN1Q14457 450 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
DDX55-212ENST00000544738 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 NUP93Q8N1F7 819 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 GUF1Q8N442 669 aaKnown RBP17.19■□□□□ 0.34
DDX55-212ENST00000544738 CCDC33Q8N5R6 958 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 PDZD8Q8NEN9 1154 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 FSCN3Q9NQT6 498 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 PTPRDP23468 1912 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 ACACAQ13085 2346 aa17.19■□□□□ 0.34
DDX55-212ENST00000544738 CLDN5O00501 218 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 KRT13P13646 458 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 YWHAQP27348 245 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 PTGER3P43115 390 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 VAMP7P51809 220 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 UNC93AQ86WB7 457 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 RASSF3Q86WH2 238 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 MDGA1Q8NFP4 955 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 OVCA2Q8WZ82 227 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 LRIG1Q96JA1 1093 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 CNOT6LQ96LI5 555 aaKnown RBP17.18■□□□□ 0.34
DDX55-212ENST00000544738 MED10Q9BTT4 135 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms