RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 BHLHA9Q7RTU4 235 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 TTC9BQ8N6N2 239 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 SCAMP5Q8TAC9 235 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 CENPIQ92674 756 aaPredicted RBP31.84■■■□□ 2.69
CCM2-219ENST00000544363 ABHD8Q96I13 439 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 NGRNQ9NPE2 291 aaKnown RBP31.84■■■□□ 2.69
CCM2-219ENST00000544363 RBM12Q9NTZ6 932 aaKnown RBP31.84■■■□□ 2.69
CCM2-219ENST00000544363 STK39Q9UEW8 545 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 TLL1O43897 1013 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 TRUB2O95900 331 aaKnown RBP31.83■■■□□ 2.69
CCM2-219ENST00000544363 RPL17P18621 184 aaKnown RBP31.83■■■□□ 2.69
CCM2-219ENST00000544363 KRT17Q04695 432 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 RCOR2Q8IZ40 523 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 VPS52Q8N1B4 723 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 CLSTN3Q9BQT9 956 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 PCSK1NQ9UHG2 260 aa31.83■■■□□ 2.69
CCM2-219ENST00000544363 WDR27A2RRH5 827 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 FGF18O76093 207 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 LTFP02788 710 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 URODP06132 367 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 GPR15P49685 360 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 SLC25A52Q3SY17 297 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 RAB6CQ53S08 254 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 DCAF6Q58WW2 860 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 ZFYVE27Q5T4F4 411 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 MMGT1Q8N4V1 131 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 RBM41Q96IZ5 413 aaKnown RBP31.82■■■□□ 2.69
CCM2-219ENST00000544363 RAB6CQ9H0N0 254 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 ZWILCHQ9H900 591 aa31.82■■■□□ 2.69
CCM2-219ENST00000544363 KRIT1O00522 736 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 KRT1P04264 644 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 HAPLN1P10915 354 aaPredicted RBP31.82■■■□□ 2.68
CCM2-219ENST00000544363 TFE3P19532 575 aaPredicted RBP31.82■■■□□ 2.68
CCM2-219ENST00000544363 RASIP1Q5U651 963 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 SLC13A5Q86YT5 568 aaPredicted RBP31.82■■■□□ 2.68
CCM2-219ENST00000544363 NUP93Q8N1F7 819 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 CRISPLD1Q9H336 500 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 SLC27A5Q9Y2P5 690 aa31.82■■■□□ 2.68
CCM2-219ENST00000544363 FYNP06241 537 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 HDAC4P56524 1084 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 SMC1AQ14683 1233 aaKnown RBP31.81■■■□□ 2.68
CCM2-219ENST00000544363 MGAT5BQ3V5L5 792 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 SDHAF4Q5VUM1 108 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 STRADAQ7RTN6 431 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 CCDC50Q8IVM0 306 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 TSC1Q92574 1164 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 NT5C3BQ969T7 300 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 TBCBQ99426 244 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 AP1M1Q9BXS5 423 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 ADAM33Q9BZ11 813 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 KLHL11Q9NVR0 708 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 STAP1Q9ULZ2 295 aa31.81■■■□□ 2.68
CCM2-219ENST00000544363 PRPSAP2O60256 369 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 DUSP4Q13115 394 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 GPR65Q8IYL9 337 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 PEBP4Q96S96 227 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 NPY6RQ99463 290 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 NAALADL1Q9UQQ1 740 aa31.8■■■□□ 2.68
CCM2-219ENST00000544363 CAPN9O14815 690 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 CETN2P41208 172 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 SULT1E1P49888 294 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 SMTNL2Q2TAL5 461 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 ODF2Q5BJF6 829 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 KCNT1Q5JUK3 1230 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 SYPL2Q5VXT5 272 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 CYP4V2Q6ZWL3 525 aaPredicted RBP31.79■■■□□ 2.68
CCM2-219ENST00000544363 RNF25Q96BH1 459 aaPredicted RBP31.79■■■□□ 2.68
CCM2-219ENST00000544363 SLITRK1Q96PX8 696 aa31.79■■■□□ 2.68
CCM2-219ENST00000544363 SEPT5Q99719 369 aaPredicted RBP31.79■■■□□ 2.68
CCM2-219ENST00000544363 LCHNA4D1U4 455 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 CCDC188H7C350 402 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 FSCN2O14926 492 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 RARAP10276 462 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 COPS2P61201 443 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 RPL10AP62906 217 aaKnown RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 IFRD2Q12894 506 aaPredicted RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 ELF2Q15723 593 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 SCYL2Q6P3W7 929 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 RAPGEF5Q92565 580 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 ACSF2Q96CM8 615 aaPredicted RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 SPATA17Q96L03 361 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 TRIM62Q9BVG3 475 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 FBXO44Q9H4M3 255 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 MRPL17Q9NRX2 175 aaKnown RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 AFF4Q9UHB7 1163 aaKnown RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 PI4K2BG5E9Z4 385 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 SOAT2O75908 522 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 ENDOD1O94919 500 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 ABLIM3O94929 683 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 BOLA3Q53S33 107 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 BSPRYQ5W0U4 402 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 TPGS2Q68CL5 300 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 BEND5Q7L4P6 421 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 BNIPLQ7Z465 357 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 ADAT2Q7Z6V5 191 aaKnown RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 KLHL23Q8NBE8 558 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 CMASQ8NFW8 434 aaPredicted RBP31.78■■■□□ 2.68
CCM2-219ENST00000544363 ZNF461Q8TAF7 563 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 RRN3Q9NYV6 651 aa31.78■■■□□ 2.68
CCM2-219ENST00000544363 IL37Q9NZH6 218 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms