RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 THADAQ6YHU6 1953 aa10.1□□□□□ -0.79
C2CD3-220ENST00000544293 SETXQ7Z333 2677 aaKnown RBP10.1□□□□□ -0.79
C2CD3-220ENST00000544293 CLDN5O00501 218 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 TBCAO75347 108 aaKnown RBP10.09□□□□□ -0.79
C2CD3-220ENST00000544293 GABBR2O75899 941 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 ADH1CP00326 375 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 ABL1P00519 1130 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 ZDHHC11BP0C7U3 371 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 MBL2P11226 248 aaPredicted RBP10.09□□□□□ -0.79
C2CD3-220ENST00000544293 HOXB2P14652 356 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 GARTP22102 1010 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 NTSR1P30989 418 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 HOXD13P35453 343 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 PPP3CCP48454 512 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 PDE6CP51160 858 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 CYP27A1Q02318 531 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 GRIK2Q13002 908 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 MDH1BQ5I0G3 518 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 MCTP1Q6DN14 999 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 SLC36A4Q6YBV0 504 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 TMPRSS7Q7RTY8 843 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 GLIS3Q8NEA6 775 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 SCAMP5Q8TAC9 235 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
C2CD3-220ENST00000544293 DNASE2BQ8WZ79 361 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 HVCN1Q96D96 273 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 CALML4Q96GE6 196 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 HPDLQ96IR7 371 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 LRIG1Q96JA1 1093 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 MRGPRX1Q96LB2 322 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 KCNK16Q96T55 309 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 SPHK2Q9NRA0 654 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 DKK4Q9UBT3 224 aa10.09□□□□□ -0.79
C2CD3-220ENST00000544293 HELZ2Q9BYK8 2649 aaKnown RBP10.09□□□□□ -0.79
C2CD3-220ENST00000544293 URB1O60287 2271 aaKnown RBP10.09□□□□□ -0.79
C2CD3-220ENST00000544293 ACACAQ13085 2346 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 FAM92AA1XBS5 289 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 KCNJ18B7U540 433 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 C1QL1O75973 258 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 PRPF6O94906 941 aaKnown RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 TBX18O95935 607 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 SYPP08247 313 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 ATXN1LP0C7T5 689 aaKnown RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 PTPN1P18031 435 aaKnown RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 ABCD1P33897 745 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 GNL1P36915 607 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 PLEKHG6Q3KR16 790 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 C10orf76Q5T2E6 689 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 ACCSQ96QU6 501 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 CCSER2Q9H7U1 834 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 WSB2Q9NYS7 404 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-220ENST00000544293 TBC1D14Q9P2M4 693 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 DEC1Q9P2X7 70 aa10.08□□□□□ -0.8
C2CD3-220ENST00000544293 DENND4CQ5VZ89 1909 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 MYO16Q9Y6X6 1858 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 A0A087WV48 116 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TRABD2BA6NFA1 517 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TRIM66O15016 1216 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 ZNF217O75362 1048 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TACC1O75410 805 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 LDHAP00338 332 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 PRB1P04280 392 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 YWHAQP27348 245 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 LONP1P36776 959 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 CYP4F3Q08477 520 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TDRD10Q5VZ19 366 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 NUP93Q8N1F7 819 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 ZMIZ2Q8NF64 920 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 OTUB2Q96DC9 234 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 MKRN2Q9H000 416 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 MRPL44Q9H9J2 332 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 FBXO10Q9UK96 956 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 FNDC3AQ9Y2H6 1198 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 PLXNB3Q9ULL4 1909 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 KIAA1549LQ6ZVL6 1849 aa10.07□□□□□ -0.8
C2CD3-220ENST00000544293 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
C2CD3-220ENST00000544293 OBSL1O75147 1896 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 PI4KAP42356 2102 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 TNRC6BQ9UPQ9 1833 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 A0A087X0B3 334 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 BEST1O76090 585 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 CD2BP2O95400 341 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 ANXA13P27216 316 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 IFRD2Q12894 506 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms