RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TSC2P49815 1807 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 CLDN5O00501 218 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 BEST1O76090 585 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 IFNB1P01574 187 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 RBP3P10745 1247 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 LCP1P13796 627 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 ACAT1P24752 427 aaKnown RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 GAD2Q05329 585 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 DPYSL2Q16555 572 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 ANKRD20A8PQ5CZ79 823 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 FAM26DQ5JW98 314 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 MAP3K21Q5TCX8 1036 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 CYP4F22Q6NT55 531 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 MDM1Q8TC05 714 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 SPATA18Q8TC71 538 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 BCAS4Q8TDM0 211 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 RTP4Q96DX8 246 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 WDR83Q9BRX9 315 aaKnown RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 ZNF670Q9BS34 389 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 USP29Q9HBJ7 922 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 COL4A4P53420 1690 aaPredicted RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 NDC80O14777 642 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 MCF2LO15068 1137 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 GPR182O15218 404 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 TRAPPC3O43617 180 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 DAB1O75553 588 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 ELNP15502 786 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 NPR3P17342 541 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 CD52P31358 61 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 L1CAMP32004 1257 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 SEC24CP53992 1094 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 ATXN1P54253 815 aaKnown RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 CBLBQ13191 982 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 LPIN1Q14693 890 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 CD300LGQ6UXG3 332 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 EXOC3L1Q86VI1 746 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 FAM71DQ8N9W8 422 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 MYCBPAPQ8TBZ2 947 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 ATXN2LQ8WWM7 1075 aaKnown RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 NT5C3BQ969T7 300 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 RABEP2Q9H5N1 569 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
LDB3-207ENST00000542786 PADI3Q9ULW8 664 aa14.78□□□□□ -0.04
LDB3-207ENST00000542786 E7ESA3 106 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 TMEM63AO94886 807 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 THP07101 528 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 TGM2P21980 687 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 GCAP28676 217 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 SCNN1GP51170 649 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 CLCNKBP51801 687 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 NRLP54845 237 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 KRT81Q14533 505 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 SCYL2Q6P3W7 929 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 CLEC20AQ6ZU45 233 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 STRADAQ7RTN6 431 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 MAP7D3Q8IWC1 876 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 PPIL6Q8IXY8 311 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 HACE1Q8IYU2 909 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 RSAD2Q8WXG1 361 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 NDRG1Q92597 394 aaKnown RBP14.77□□□□□ -0.05
LDB3-207ENST00000542786 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 MAGEB5Q9BZ81 275 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 DNAI2Q9GZS0 605 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 STMN4Q9H169 189 aaPredicted RBP14.77□□□□□ -0.05
LDB3-207ENST00000542786 TMEM30AQ9NV96 361 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 CTNNAL1Q9UBT7 734 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.77□□□□□ -0.05
LDB3-207ENST00000542786 USP3Q9Y6I4 520 aa14.77□□□□□ -0.05
LDB3-207ENST00000542786 TCRBV7S3A2A0A539 114 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 RPL9P32969 192 aaKnown RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 THPOP40225 353 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 MATKP42679 507 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 ROR1Q01973 937 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 ADIGQ0VDE8 80 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 STAT4Q14765 748 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 UPP1Q16831 310 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 SKIDA1Q1XH10 827 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 MSS51Q4VC12 460 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 MDH1BQ5I0G3 518 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 EFHC1Q5JVL4 640 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 ERMARDQ5T6L9 678 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 PCGF5Q86SE9 256 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 NLRP14Q86W24 1093 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 TMEM86AQ8N2M4 240 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 CCDC185Q8N715 623 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 TTC25Q96NG3 672 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 SLC2A13Q96QE2 648 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 XPO6Q96QU8 1125 aaKnown RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 KCTD15Q96SI1 283 aaPredicted RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDB3-207ENST00000542786 CLUHO75153 1309 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 KIF3CO14782 793 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 APOL1O14791 398 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 INPPL1O15357 1258 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms