RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 CCR2P41597 374 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 PGFP49763 221 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 TUBP50607 506 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 YWHAZP63104 245 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 KRT83P78385 493 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ADIGQ0VDE8 80 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 MAMLD1Q13495 774 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 VEPH1Q14D04 833 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ACAP1Q15027 740 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ATAT1Q5SQI0 421 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 BSPRYQ5W0U4 402 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 LLGL2Q6P1M3 1020 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 KLHDC10Q6PID8 442 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 POTEHQ6S545 545 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 H2AFVQ71UI9 128 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 GAREM2Q75VX8 874 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 GRASPQ7Z6J2 395 aaPredicted RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 GPIHBP1Q8IV16 184 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 HS6ST3Q8IZP7 471 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ELMOD1Q8N336 334 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ARHGAP18Q8N392 663 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 C12orf76Q8N812 135 aaPredicted RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 MSANTD4Q8NCY6 345 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 C3orf20Q8ND61 904 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 FNIP1Q8TF40 1166 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 CLEC4CQ8WTT0 213 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 NDRG1Q92597 394 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 TRIM11Q96F44 468 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 PGAP3Q96FM1 320 aaPredicted RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 CALR3Q96L12 384 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 SLITRK1Q96PX8 696 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 SLC2A13Q96QE2 648 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 DDX23Q9BUQ8 820 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 DEF6Q9H4E7 631 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 NMUR1Q9HB89 426 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF334Q9HCZ1 680 aaPredicted RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 MRPL47Q9HD33 250 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 TLR8Q9NR97 1041 aaKnown RBP6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ST7Q9NRC1 585 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 KCND1Q9NSA2 647 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 PARVAQ9NVD7 372 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.16□□□□□ -1.429e-6■■■■□ 21.7
ABCF1-207ENST00000542772 TMEM51Q9NW97 253 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 HCFC1R1Q9NWW0 138 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 OSER1Q9NX31 292 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 CLDND1Q9NY35 253 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 ZMYM5Q9UJ78 669 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 COG5Q9UP83 839 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 CLUHO75153 1309 aa6.16□□□□□ -1.42
ABCF1-207ENST00000542772 C2orf16Q68DN1 1984 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SPTBN5Q9NRC6 3674 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 RCCD1A6NED2 376 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 C2CD4BA6NLJ0 364 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 PIK3R2O00459 728 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 NRG2O14511 850 aaPredicted RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TADA3O75528 432 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CSPG5O95196 566 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 OAS1P00973 400 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 IGLV3-25P01717 112 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 LTFP02788 710 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 KRT3P12035 628 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 FOSL2P15408 326 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TCF3P15923 654 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 GABRR2P28476 465 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CDC25CP30307 473 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 NOS2P35228 1153 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 MATKP42679 507 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 MTHFRP42898 656 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 VAV2P52735 878 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 YWHAGP61981 247 aaKnown RBP eCLIP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SPA17Q15506 151 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TAF5Q15542 800 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TAF12Q16514 161 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 C2CD6Q53TS8 623 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CYP4A22Q5TCH4 519 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SYPL2Q5VXT5 272 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 OR6B2Q6IFH4 312 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 CES5AQ6NT32 575 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 MSANTD2Q6P1R3 559 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 HFE2Q6ZVN8 426 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 FAM183BPQ6ZVS7 135 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 DNAAF5Q86Y56 855 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 DEFB106AQ8N104 65 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SIX6OS1Q8N1H7 587 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 KIAA1958Q8N8K9 716 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SMRP1Q8NCR6 262 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 STKLD1Q8NE28 680 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SLC35G2Q8TBE7 412 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 IPO4Q8TEX9 1081 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 UBE2Q2Q8WVN8 375 aa6.15□□□□□ -1.42
ABCF1-207ENST00000542772 SMG7Q92540 1137 aaKnown RBP6.15□□□□□ -1.42
ABCF1-207ENST00000542772 HLA-CQ95604 372 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms