RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PAPOLAP51003 745 aaKnown RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CXADRP78310 365 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 SCAPQ12770 1279 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 PPFIA1Q13136 1202 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 PRPF4BQ13523 1007 aaKnown RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 NAA25Q14CX7 972 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 PLEKHO1Q53GL0 409 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 BEND6Q5SZJ8 279 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CWC27Q6UX04 472 aaKnown RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 SESTD1Q86VW0 696 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 ADGRG3Q86Y34 549 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 GALNT15Q8N3T1 639 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 AFAP1Q8N556 730 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TEX9Q8N6V9 391 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 FAM76AQ8TAV0 307 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 RUBCNQ92622 972 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CYFIP2Q96F07 1278 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 Q96MF0 132 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 PTGFRNQ9P2B2 879 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CIDEBQ9UHD4 219 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 THRAP3Q9Y2W1 955 aaKnown RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CAPN7Q9Y6W3 813 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 MYH15Q9Y2K3 1946 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 MED1Q15648 1581 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SH3TC1Q8TE82 1336 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 TCRBV7S2A1N4TA0A589 114 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 EME2A4GXA9 379 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CREB3O43889 395 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SEC31AO94979 1220 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 ESRRBO95718 433 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 AMY1AP04745 511 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 FAM200BP0CF97 657 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 TYRP1P17643 537 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 DESP17661 470 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 POU3F3P20264 500 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 AGXTP21549 392 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SYT1P21579 422 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 FDXRP22570 491 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 GCSHP23434 173 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 ACTN3Q08043 901 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 NEXNQ0ZGT2 675 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 IFT88Q13099 833 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 MPP3Q13368 585 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 POSTNQ15063 836 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CLUL1Q15846 466 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 TWISTNBQ3B726 338 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC40Q4G0X9 1142 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC92Q53HC0 331 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 WDR78Q5VTH9 848 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 MIS18BP1Q6P0N0 1132 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CEP85Q6P2H3 762 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 FOXR2Q6PJQ5 311 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC73Q6ZRK6 1079 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SEPT14Q6ZU15 432 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SEM1Q6ZVN7 128 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 IQCF2Q8IXL9 164 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 ZGPATQ8N5A5 531 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 SMYD1Q8NB12 490 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 TBC1D5Q92609 795 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 ZBTB10Q96DT7 871 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 RBM41Q96IZ5 413 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 JAKMIP1Q96N16 626 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 MMADHCQ9H3L0 296 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 PDE11AQ9HCR9 933 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 ZCCHC17Q9NP64 241 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 TMOD4Q9NZQ9 345 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 INTUQ9ULD6 942 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 BARX2Q9UMQ3 279 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 L1RE1Q9UN81 338 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 MTO1Q9Y2Z2 717 aaKnown RBP6.36□□□□□ -1.39
XRCC4-206ENST00000542685 MRFAP1Q9Y605 127 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 NRXN3Q9Y4C0 1643 aa6.36□□□□□ -1.39
XRCC4-206ENST00000542685 F8VZ95 297 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 KIAA0391O15091 583 aaKnown RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 EIF3HO15372 352 aaKnown RBP eCLIP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MGRN1O60291 552 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 VIMP08670 466 aaKnown RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 ZNF24P17028 368 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 DDCP20711 480 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 PAX3P23760 479 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MPLP40238 635 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 NLRP5P59047 1200 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 KLF1Q13351 362 aaPredicted RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MTM1Q13496 603 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 RIPK1Q13546 671 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 CMPK2Q5EBM0 449 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 WDR93Q6P2C0 686 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 OTUD6AQ7L8S5 288 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 LCA5Q86VQ0 697 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 PRIMA1Q86XR5 153 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 RHOT1Q8IXI2 618 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 NME8Q8N427 588 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 ERMNQ8TAM6 284 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 NRG4Q8WWG1 115 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MARS2Q96GW9 593 aaKnown RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 SPAG5Q96R06 1193 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 NAP1L3Q99457 506 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms