RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CLIC6Q96NY7 704 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 GABRG3Q99928 467 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 B3GNT5Q9BYG0 378 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ELOVL4Q9GZR5 314 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 XYLT2Q9H1B5 865 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 DPEP3Q9H4B8 488 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 CLIC4Q9Y696 253 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ASXL3Q9C0F0 2248 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 A0A1W2PQD8 194 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ZNF233A6NK53 670 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CLDN5O00501 218 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 MAP3K13O43283 966 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 TGFB1I1O43294 461 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CACNG3O60359 315 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 OPHN1O60890 802 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CBFA2T3O75081 653 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 DKK1O94907 266 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CST3P01034 146 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 TNNC2P02585 160 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CFIP05156 583 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 MBL2P11226 248 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 NDUFV2P19404 249 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 YWHAQP27348 245 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 NTSR1P30989 418 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 GNL1P36915 607 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 PGFP49763 221 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 GFPT1Q06210 699 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 SLC14A1Q13336 389 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 HNRNPDQ14103 355 aaKnown RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 SURF1Q15526 300 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 SOWAHCQ53LP3 525 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 EGFLAMQ63HQ2 1017 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 TRMT11Q7Z4G4 463 aaKnown RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 GLRX5Q86SX6 157 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 TTC30AQ86WT1 665 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 TMEM25Q86YD3 366 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 SYCP3Q8IZU3 236 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ZNF513Q8N8E2 541 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 B3GALNT2Q8NCR0 500 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 PDZD8Q8NEN9 1154 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ZMIZ2Q8NF64 920 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 SCAMP5Q8TAC9 235 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ZNF419Q96HQ0 510 aaPredicted RBP7.76□□□□□ -1.17
YBX3-209ENST00000540747 SLITRK1Q96PX8 696 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ACOX2Q99424 681 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 TRIM9Q9C026 710 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 VRTNQ9H8Y1 702 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CD93Q9NPY3 652 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 SPHK2Q9NRA0 654 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 PANK4Q9NVE7 773 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 HSPBP1Q9NZL4 362 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 MARK1Q9P0L2 795 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
YBX3-209ENST00000540747 DEC1Q9P2X7 70 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 CABIN1Q9Y6J0 2220 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 ADAMTS9Q9P2N4 1935 aa7.76□□□□□ -1.17
YBX3-209ENST00000540747 MAST4O15021 2626 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 TBC1D3BA6NDS4 549 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 PRRT4C9JH25 899 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 SH3BP5O60239 455 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 ZNF217O75362 1048 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 RTN3O95197 1032 aaPredicted RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 CISD3P0C7P0 127 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 C7P10643 843 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HOXB2P14652 356 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 IDEP14735 1019 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 SLC5A3P53794 718 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 CYP24A1Q07973 514 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 EHHADHQ08426 723 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 SCAPQ12770 1279 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 ENPP2Q13822 863 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 PSMD6Q15008 389 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 E2F4Q16254 413 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 SNRNP35Q16560 246 aaKnown RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 C10orf76Q5T2E6 689 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HECTD3Q5T447 861 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 RRAGBQ5VZM2 374 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 LARP1BQ659C4 914 aaKnown RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 CCNI2Q6ZMN8 369 aaPredicted RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 CCDC73Q6ZRK6 1079 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HTR3DQ70Z44 454 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 METTL3Q86U44 580 aaKnown RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 FAM35AQ86V20 835 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 NUP93Q8N1F7 819 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HDDC3Q8N4P3 179 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 TRIML1Q8N9V2 468 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 BAHD1Q8TBE0 780 aaPredicted RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 PLEKHO2Q8TD55 490 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 IPO4Q8TEX9 1081 aaKnown RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 DNASE2BQ8WZ79 361 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 ZNF516Q92618 1163 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HPS3Q969F9 1004 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 FBXO32Q969P5 355 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 HSPA12BQ96MM6 686 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 CAMK1GQ96NX5 476 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms