RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 URODP06132 367 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GRK3P35626 688 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PRIM2P49643 509 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 CLK1P49759 484 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 BST2Q10589 180 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ACAP1Q15027 740 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 NFE2Q16621 373 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 OR2W6PQ8NHA6 318 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 FAM172AQ8WUF8 416 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GANQ9H2C0 597 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 FBXO28Q9NVF7 368 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 C6orf203Q9P0P8 240 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 LNPEPQ9UIQ6 1025 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 BARX2Q9UMQ3 279 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 RBP1P09455 135 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 IL1R1P14778 569 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 NUDT2P50583 147 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 AMPD2Q01433 879 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 LAMTOR4Q0VGL1 99 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PTGISQ16647 500 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PAPD7Q5XG87 772 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 C11orf63Q6NUN7 778 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 IFNEQ86WN2 208 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 REXO1L1PQ8IX06 675 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 DNAJC9Q8WXX5 260 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 CASP10Q92851 521 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 VPS50Q96JG6 964 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 CAMKK2Q96RR4 588 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PRDM16Q9HAZ2 1276 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 IL1RAPL1Q9NZN1 696 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 TRPM5Q9NZQ8 1165 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 TTLL13PA6NNM8 815 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 NPM3O75607 178 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 MBL2P11226 248 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 CHI3L1P36222 383 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 RENBPP51606 427 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 TGM3Q08188 693 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ADRM1Q16186 407 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 NYAP1Q6ZVC0 841 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SMIM5Q71RC9 77 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SLC47A2Q86VL8 602 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SEMA6BQ9H3T3 888 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 KRT84Q9NSB2 600 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ADGRA3Q8IWK6 1321 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SUPT7LO94864 414 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 FGFR2P21802 821 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 RRM2P31350 389 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 EPHX2P34913 555 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 BLVRAP53004 296 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 OAZ1P54368 228 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ERVK-24P63145 666 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 MRPS15P82914 257 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ELAVL2Q12926 359 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GRTP1Q5TC63 336 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PLEKHM3Q6ZWE6 761 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 CYP4Z1Q86W10 505 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GALNT4Q8N4A0 578 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 ZKSCAN4Q969J2 545 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 YME1L1Q96TA2 773 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 TMBIM4Q9HC24 238 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GRK2P25098 689 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 RAB27AP51159 221 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SEC23AQ15436 765 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 LRRC36Q1X8D7 754 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 SPANXN3Q5MJ09 141 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PRAMEF18Q5VWM3 479 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 LRRC8DQ7L1W4 858 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 TUBGCP3Q96CW5 907 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 FAM118BQ9BPY3 351 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 GPRC5CQ9NQ84 441 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
LSAMP-207ENST00000539563 PROSCO94903 275 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 GLP2RO95838 553 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 IMPDH2P12268 514 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 TOB1P50616 345 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 MRPS35P82673 323 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FAM117BQ6P1L5 589 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 STRA8Q7Z7C7 330 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 DDX42Q86XP3 938 aaKnown RBP eCLIP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 RIN3Q8TB24 985 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 OSCP1Q8WVF1 389 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 BTN2A2Q8WVV5 523 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 THUMPD3Q9BV44 507 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 HEY2Q9UBP5 337 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 SYNPO2Q9UMS6 1093 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 HNRNPCP07910 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 RHOCP08134 193 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CCDC159P0C7I6 412 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 GYS1P13807 737 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 TRIP10Q15642 601 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 PKN2Q16513 984 aaKnown RBP6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CCDC153Q494R4 210 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 GLRA4Q5JXX5 417 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 IYDQ6PHW0 289 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 CBWD2Q8IUF1 395 aa6.68□□□□□ -1.34
LSAMP-207ENST00000539563 FAM111AQ96PZ2 611 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms