RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
GNE-204ENST00000539208 PDCD11Q14690 1871 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 A8MXQ7 604 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 HAS3O00219 553 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 APOL1O14791 398 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 CHADO15335 359 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 DNAJC8O75937 253 aaPredicted RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 KCNE1P15382 129 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 TAC1P20366 129 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 PNPLA4P41247 253 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 KCNJ11Q14654 390 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 MFSD10Q14728 455 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 RGS9BPQ6ZS82 235 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 SLC26A9Q7LBE3 791 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 PQLC3Q8N755 202 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 CENPIQ92674 756 aaPredicted RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 FRMD8Q9BZ67 464 aaPredicted RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 DNAI2Q9GZS0 605 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 NGRNQ9NPE2 291 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 PAK5Q9P286 719 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 SMIM28A0A1B0GU29 152 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 BCLAF3A2AJT9 711 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 H7C0C1 242 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 XPOTO43592 962 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 ATP2A2P16615 1042 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 SSTR1P30872 391 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 ATP5OP48047 213 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 BCAT1P54687 386 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 BASP1P80723 227 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 SCYL2Q6P3W7 929 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 CAPN12Q6ZSI9 719 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 SPATA21Q7Z572 469 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 ZC3H18Q86VM9 953 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 PALM2Q8IXS6 379 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 KBTBD7Q8WVZ9 684 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 ZNF560Q96MR9 790 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 SNRNP25Q9BV90 132 aaKnown RBP18.68■□□□□ 0.58
GNE-204ENST00000539208 PRKAG3Q9UGI9 489 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 SLC12A4Q9UP95 1085 aa18.68■□□□□ 0.58
GNE-204ENST00000539208 KPNA7A9QM74 516 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 TYROBPO43914 113 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 RASSF9O75901 435 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 HDAC4P56524 1084 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 BCAR1P56945 870 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 SNX17Q15036 470 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 GLRA4Q5JXX5 417 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 C2orf69Q8N8R5 385 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 PCDH19Q8TAB3 1148 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 DPEP3Q9H4B8 488 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 ARL2BPQ9Y2Y0 163 aa18.67■□□□□ 0.58
GNE-204ENST00000539208 FOXN2P32314 431 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
GNE-204ENST00000539208 ACADSBP45954 432 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 PSEN2P49810 448 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 ADCY1Q08828 1119 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 MAP2K5Q13163 448 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 XRCC4Q13426 336 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 SPARCL1Q14515 664 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 HIC1Q14526 733 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 MTFR1Q15390 333 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 BBS9Q3SYG4 887 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 PRAMEF19Q5SWL8 479 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 C1orf228Q6PIY5 440 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 C4orf22Q6V702 233 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 FBF1Q8TES7 1133 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 DNAJB3Q8WWF6 145 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 SPAG6O75602 509 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 TOMM70O94826 608 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
GNE-204ENST00000539208 AKAP5P24588 427 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 HNRNPH1P31943 449 aaKnown RBP18.66■□□□□ 0.58
GNE-204ENST00000539208 B3GNT5Q9BYG0 378 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 PIN4Q9Y237 131 aaKnown RBP18.66■□□□□ 0.58
GNE-204ENST00000539208 TEX264Q9Y6I9 313 aa18.66■□□□□ 0.58
GNE-204ENST00000539208 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 SPAG7O75391 227 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 FGFR1P11362 822 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 MAGEA6P43360 314 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 DPYSL2Q16555 572 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 CA9Q16790 459 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 UBXN11Q5T124 520 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 OLFML2BQ68BL8 750 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 C7orf31Q8N865 590 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 GBP7Q8N8V2 638 aaPredicted RBP18.65■□□□□ 0.58
GNE-204ENST00000539208 TMEM40Q8WWA1 233 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 HSFY1Q96LI6 401 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 CYTH2Q99418 400 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 PAFAH2Q99487 392 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 SLC40A1Q9NP59 571 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 GPATCH2LQ9NWQ4 482 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 ZFXP17010 805 aaPredicted RBP18.65■□□□□ 0.58
GNE-204ENST00000539208 TAF6P49848 677 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 CPT1AP50416 773 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 CRYBB1P53674 252 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms