RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CACHD1Q5VU97 1274 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 VSTM1Q6UX27 236 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 C9orf47Q6ZRZ4 202 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-209ENST00000539197 ZBTB34Q8NCN2 500 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 IL31RAQ8NI17 732 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 GPATCH3Q96I76 525 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 LYZL4Q96KX0 146 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 CAMK1GQ96NX5 476 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 TAAR9Q96RI9 348 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 VN1R3Q9BXE9 311 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 TBX3O15119 743 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 TMPRSS11DO60235 418 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 PSG1P11464 419 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 TIRAPP58753 221 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 CFHR1Q03591 330 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 DEUP1Q05D60 604 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC7-209ENST00000539197 ARFGAP1Q8N6T3 406 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 SLC35G2Q8TBE7 412 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 RTFDC1Q9BY42 306 aaPredicted RBP6.26□□□□□ -1.41
CCDC7-209ENST00000539197 TRIM5Q9C035 493 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 XPNPEP3Q9NQH7 507 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 GAR1Q9NY12 217 aaKnown RBP6.26□□□□□ -1.41
CCDC7-209ENST00000539197 STK32BQ9NY57 414 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 PAXBP1Q9Y5B6 917 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 HS3ST3B1Q9Y662 390 aa6.26□□□□□ -1.41
CCDC7-209ENST00000539197 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 PRR23D1E9PI22 279 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-209ENST00000539197 CNOT3O75175 753 aaKnown RBP6.25□□□□□ -1.41
CCDC7-209ENST00000539197 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 PRR23D2P0DMB1 279 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-209ENST00000539197 CTSAP10619 480 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 MCM5P33992 734 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 HTR6P50406 440 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 SLC14A1Q13336 389 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 KCNB1Q14721 858 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 INSCQ1MX18 579 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 CC2D1BQ5T0F9 858 aaKnown RBP6.25□□□□□ -1.41
CCDC7-209ENST00000539197 KRTAP5-11Q6L8G4 156 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 NPNTQ6UXI9 565 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 MICU3Q86XE3 530 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 ACRBPQ8NEB7 543 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 JPH3Q8WXH2 748 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-209ENST00000539197 PPP1R9BQ96SB3 815 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 B3GNT5Q9BYG0 378 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 CPNE7Q9UBL6 633 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 TTC3P53804 2025 aa6.25□□□□□ -1.41
CCDC7-209ENST00000539197 RGS10O43665 173 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 EN2P19622 333 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-209ENST00000539197 SLC7A1P30825 629 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 AGFG1P52594 562 aaKnown RBP6.24□□□□□ -1.41
CCDC7-209ENST00000539197 MCL1Q07820 350 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 SEMA3AQ14563 771 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 METTL25Q8N6Q8 603 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 ZCRB1Q8TBF4 217 aaKnown RBP6.24□□□□□ -1.41
CCDC7-209ENST00000539197 ZFYVE19Q96K21 471 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 TRMOQ9BU70 441 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 ZNF518BQ9C0D4 1074 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 NMRK2Q9NPI5 230 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 TRIM36Q9NQ86 728 aa6.24□□□□□ -1.41
CCDC7-209ENST00000539197 EXOC5O00471 708 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 CD3EAPO15446 510 aaKnown RBP6.23□□□□□ -1.41
CCDC7-209ENST00000539197 PHGDHO43175 533 aaKnown RBP6.23□□□□□ -1.41
CCDC7-209ENST00000539197 TULP3O75386 442 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 ALDH1L1O75891 902 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 HSPA6P17066 643 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 CFHR3Q02985 330 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 PTPROQ16827 1216 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 COLCA1Q6ZS62 124 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 SMRP1Q8NCR6 262 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 NGDNQ8NEJ9 315 aaKnown RBP6.23□□□□□ -1.41
CCDC7-209ENST00000539197 SPSB4Q96A44 273 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 KAZALD1Q96I82 304 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 A1CFQ9NQ94 594 aaKnown RBP6.23□□□□□ -1.41
CCDC7-209ENST00000539197 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
CCDC7-209ENST00000539197 PNMA8BQ9ULN7 279 aaPredicted RBP6.23□□□□□ -1.41
CCDC7-209ENST00000539197 B4DGG1 531 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 CLIC1O00299 241 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 RRP9O43818 475 aaKnown RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 MARCH6O60337 910 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 TOMM40O96008 361 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 PTDSS1P48651 473 aaKnown RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 HSF1Q00613 529 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 TIAL1Q01085 375 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 PIN1Q13526 163 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 MFSD13AQ14CX5 517 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 TTF1Q15361 905 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 SLC9C1Q4G0N8 1177 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 ANO6Q4KMQ2 910 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 EPM2AIP1Q7L775 607 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 C11orf44Q8N8P7 122 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 EDC3Q96F86 508 aaKnown RBP6.22□□□□□ -1.41
CCDC7-209ENST00000539197 AIFM3Q96NN9 605 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 FAM234AQ9H0X4 552 aa6.22□□□□□ -1.41
CCDC7-209ENST00000539197 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms