RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PKHD1P08F94 4074 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HECW2Q9P2P5 1572 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 WDR27A2RRH5 827 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 EIF3FO00303 357 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PIP5K1BO14986 540 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 NCAM2O15394 837 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SH3BP5O60239 455 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 DIAPH2O60879 1101 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 GNAI3P08754 354 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 EGR1P18146 543 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 EEF1GP26641 437 aaKnown RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 EPHA3P29320 983 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 GRK5P34947 590 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PSMB10P40306 273 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 STAT1P42224 750 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PXNP49023 591 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MEOX1P50221 254 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ALDH3A2P51648 485 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 GNAI1P63096 354 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 EPS8Q12929 822 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ARHGEF7Q14155 803 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 KCNJ12Q14500 433 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TOMM20Q15388 145 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 KCNMB1Q16558 191 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SLC4A8Q2Y0W8 1093 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 BTBD16Q32M84 506 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SPATS1Q496A3 300 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MAP3K21Q5TCX8 1036 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LMBRD2Q68DH5 695 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 FAM180BQ6P0A1 224 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CRTC1Q6UUV9 634 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LINGO4Q6UY18 593 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF783Q6ZMS7 281 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TRABD2AQ86V40 505 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TTC30AQ86WT1 665 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TMPRSS6Q8IU80 811 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 HERC6Q8IVU3 1022 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 METTL25Q8N6Q8 603 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ABHD5Q8WTS1 349 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LINC00476Q8WZB0 136 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MIEF2Q96C03 454 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM176AQ96HP8 235 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LCORQ96JN0 433 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 UBXN10Q96LJ8 280 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SLC38A3Q99624 504 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SH3GL2Q99962 352 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MECRQ9BV79 373 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 AGXT2Q9BYV1 514 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MID2Q9UJV3 735 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SH3BP1Q9Y3L3 701 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 AFG3L2Q9Y4W6 797 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 POLR2AP24928 1970 aaKnown RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 COL4A3Q01955 1670 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ANKRD18BA2A2Z9 1011 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TBKBP1A7MCY6 615 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF785A8K8V0 405 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 H7C1Q1 480 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SLC16A3O15427 465 aaKnown RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TGFB1I1O43294 461 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 WDHD1O75717 1129 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CCNDBP1O95273 360 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PARP1P09874 1014 aaKnown RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CD53P19397 219 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 YY1P25490 414 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CHATP28329 748 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SMARCA1P28370 1054 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 HTR7P34969 479 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PTPN7P35236 360 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LIFRP42702 1097 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PDE6CP51160 858 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF135P52742 658 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PRAMEP78395 509 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 PDE1CQ14123 709 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 NPY5RQ15761 445 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ADIPOQQ15848 244 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CCNG2Q16589 344 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 WDR72Q3MJ13 1102 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ARL13BQ3SXY8 428 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC38Q502W7 563 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 IGFL4Q6B9Z1 124 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 HIST2H2BCQ6DN03 193 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 HIST2H2BDQ6DRA6 164 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF529Q6P280 563 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 C1orf122Q6ZSJ8 110 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF804AQ7Z570 1209 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF354CQ86Y25 554 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 BRSK2Q8IWQ3 736 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 LAS2Q8IYD9 372 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM171Q8WVE6 324 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 OTULINQ96BN8 352 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 RRP36Q96EU6 259 aaKnown RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 ZBTB45Q96K62 511 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 CFAP57Q96MR6 1250 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 FNBP1Q96RU3 617 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 WDR24Q96S15 920 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 SEPT5Q99719 369 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-204ENST00000539097 FUZQ9BT04 418 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 MRI1Q9BV20 369 aa1.21□□□□□ -2.22
HIF1A-204ENST00000539097 STRA6Q9BX79 667 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms