RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 MYL4P12829 197 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 PDGFRAP16234 1089 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 HMOX2P30519 316 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ARHGAP8P85298 464 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 GTF2BQ00403 316 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 DPYSL3Q14195 570 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 INPP5AQ14642 412 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 LPCAT4Q643R3 524 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 TTC33Q6PID6 262 aaPredicted RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 OLFML1Q6UWY5 402 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ZCCHC23Q6ZST2 131 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 SMIM5Q71RC9 77 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 PODNQ7Z5L7 613 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ZNF354CQ86Y25 554 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 MAP4K3Q8IVH8 894 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 SP8Q8IXZ3 490 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ELMO3Q96BJ8 720 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ATXN7L3BQ96GX2 97 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 INO80BQ9C086 356 aaPredicted RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 ING2Q9H160 280 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 MRPL46Q9H2W6 279 aaKnown RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 EBF3Q9H4W6 596 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 EFCAB1Q9HAE3 211 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 PIDD1Q9HB75 910 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 BFARQ9NZS9 450 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 KLHL8Q9P2G9 620 aaPredicted RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 TSC22D4Q9Y3Q8 395 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 COL1A1P02452 1464 aaPredicted RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 GAKO14976 1311 aa7.09□□□□□ -1.27
SCAPER-203ENST00000538941 BAZ2AQ9UIF9 1905 aaKnown RBP7.09□□□□□ -1.27
SCAPER-203ENST00000538941 C10orf71Q711Q0 1435 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 C2orf71A6NGG8 1288 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 BIRC5O15392 142 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 VCLP18206 1134 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 GPD1P21695 349 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 RPL22P35268 128 aaKnown RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 USP46P62068 366 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 PRKG1Q13976 671 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 C16orf72Q14CZ0 275 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 SMAD1Q15797 465 aaKnown RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 KIF19Q2TAC6 998 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 N4BP2L1Q5TBK1 243 aaPredicted RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 PHF13Q86YI8 300 aaPredicted RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 RELL1Q8IUW5 271 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 BANPQ8N9N5 519 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 RNF169Q8NCN4 708 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 DLG3Q92796 817 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 CLPTM1LQ96KA5 538 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 MRPL4Q9BYD3 311 aaKnown RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 ILKAPQ9H0C8 392 aaPredicted RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 TDRD3Q9H7E2 651 aaKnown RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 WARS2Q9UGM6 360 aaKnown RBP7.09□□□□□ -1.28
SCAPER-203ENST00000538941 SEPT3Q9UH03 358 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 LZTS1Q9Y250 596 aa7.09□□□□□ -1.28
SCAPER-203ENST00000538941 CAMTA1Q9Y6Y1 1673 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 APOC4-APOC2K7ER74 178 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 LGR5O75473 907 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 APOC2P02655 101 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 VIL1P09327 827 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 ACTR3P61158 418 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 ATP13A4Q4VNC1 1196 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RNASEH2BQ5TBB1 312 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 C4orf19Q8IY42 314 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 CD101Q93033 1021 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 SLC7A6OSQ96CW6 309 aaPredicted RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RMND5BQ96G75 393 aaPredicted RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 CGRRF1Q99675 332 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 DHX35Q9H5Z1 703 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RAVER2Q9HCJ3 691 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 KCNQ5Q9NR82 932 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 PICK1Q9NRD5 415 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 AURKCQ9UQB9 309 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 INPP5FQ9Y2H2 1132 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 F8VP50 259 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 CALCAP01258 141 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 CETPP11597 493 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RAP1GDS1P52306 607 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 MGAT5Q09328 741 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RDM1Q8NG50 284 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 ZNF606Q8WXB4 792 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 BTBD9Q96Q07 612 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 QTRT2Q9H974 415 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 RABGEF1Q9UJ41 708 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 ITGB1BP2Q9UKP3 347 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 MYRFQ9Y2G1 1151 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 TCRBV9S1A1TA0A576 114 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 CHADO15335 359 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 PIAS1O75925 651 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 SRP72O76094 671 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 POLBP06746 335 aa7.08□□□□□ -1.28
SCAPER-203ENST00000538941 C6orf222P0C671 652 aaPredicted RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 HSPA1AP0DMV8 641 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 HSPA1BP0DMV9 641 aaKnown RBP7.08□□□□□ -1.28
SCAPER-203ENST00000538941 NOMO3P69849 1222 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms