RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 AHI1Q8N157 1196 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 FAM109AQ8N4B1 249 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 ARFGAP1Q8N6T3 406 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 TERB1Q8NA31 727 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 B4GALNT2Q8NHY0 566 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 LEO1Q8WVC0 666 aaPredicted RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SLITRK1Q96PX8 696 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 PRAM1Q96QH2 718 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 TDP1Q9NUW8 608 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 RGPD5Q99666 1765 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 KIF7Q2M1P5 1343 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 WASHC2AQ641Q2 1341 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 MAP2P11137 1827 aaKnown RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 ADAMTS7Q9UKP4 1686 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 THSD7AQ9UPZ6 1657 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 PNPLA6Q8IY17 1366 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 CCDC7Q96M83 1385 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 PPIP5K1Q6PFW1 1433 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF785A8K8V0 405 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 TMEM232C9JQI7 657 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 E9PSI1 815 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 TNFRSF13BO14836 293 aaPredicted RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 TLR5O60602 858 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 HSPA5P11021 654 aaKnown RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 NCLP19338 710 aaKnown RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 ID2Q02363 134 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 INPP5JQ15735 1006 aaPredicted RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF324BQ6AW86 544 aaPredicted RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 PARS2Q7L3T8 475 aaKnown RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 RNF180Q86T96 592 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 DTX2Q86UW9 622 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 ANKRD13BQ86YJ7 626 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 CERS3Q8IU89 383 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 FAM177A1Q8N128 213 aaPredicted RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 OSR1Q8TAX0 266 aaPredicted RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 XAGE5Q8WWM1 108 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 ASB5Q8WWX0 329 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 R3HDM4Q96D70 268 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 TMEM204Q9BSN7 226 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 CIPCQ9C0C6 399 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 GJB4Q9NTQ9 266 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 DNAJC28Q9NX36 388 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 INTUQ9ULD6 942 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 UTRNP46939 3433 aa2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 PARP4Q9UKK3 1724 aaKnown RBP2.37□□□□□ -2.03
CBX3P4-201ENST00000538909 CPDO75976 1380 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 INSRP06213 1382 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 GLI3P10071 1580 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 RGPD2P0DJD1 1756 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 COL14A1Q05707 1796 aaKnown RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 VIRMAQ69YN4 1812 aaKnown RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 TLR2O60603 784 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 PLGP00747 810 aaPredicted RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 A1BGP04217 495 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 FPR3P25089 353 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF135P52742 658 aaPredicted RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC5A3P53794 718 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SRSF1Q07955 248 aaKnown RBP eCLIP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 BMS1Q14692 1282 aaKnown RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 FAM187BQ17R55 369 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 L1TD1Q5T7N2 865 aaKnown RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 Q6ZWC4 215 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 ABHD11Q8NFV4 315 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 IFI44Q8TCB0 444 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 LMBR1Q8WVP7 490 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 NRG4Q8WWG1 115 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 USP7Q93009 1102 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SCAMP4Q969E2 229 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 FAM84BQ96KN1 310 aaPredicted RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC2A13Q96QE2 648 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SNX18Q96RF0 628 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 CDK19Q9BWU1 502 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 ZBTB40Q9NUA8 1239 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SERTAD3Q9UJW9 196 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 SH2B3Q9UQQ2 575 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 PCDHA13Q9Y5I0 950 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 RAD54BQ9Y620 910 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 BCL9LQ86UU0 1499 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 PKD1L3Q7Z443 1732 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 NPHP3Q7Z494 1330 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 EVC2Q86UK5 1308 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 GOLGB1Q14789 3259 aaKnown RBP2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 PARD3Q8TEW0 1356 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 JCADQ9P266 1359 aa2.36□□□□□ -2.03
CBX3P4-201ENST00000538909 CICQ96RK0 1608 aaPredicted RBP2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 DISP2A7MBM2 1401 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 NSD3Q9BZ95 1437 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TCRBV5S1A1TA0A578 114 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 ULK1O75385 1050 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 GCATO75600 419 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 SOAT2O75908 522 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 RNF8O76064 485 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 KIF20AO95235 890 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 CGAP01215 116 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 PTMSP20962 102 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 CDC25AP30304 524 aa2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 GCLCP48506 637 aaPredicted RBP2.35□□□□□ -2.03
CBX3P4-201ENST00000538909 TPTEP56180 551 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms